myRT

myRT report for GCA_014104915.1_ASM1410491v1

Download annotations/find similar RTs

Seq: JABXTA010000002.1 Escherichia fergusonii strain RHB30-C01 RHB30-C01_2, whole genome shotgun sequence (1171624 bp)
Overview 1 RT 1: 962234-966552 bp 2 RT 2: 986048-989928 bp Neighborhood of RT #1 [962234, 966569] Psu RVT-UG17 SLATT_5 PRK09692 Neighborhood of RT #2 [986048, 989933] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 962234-962806 bp Feature: domain Description: Psu Location: 962252-962789 bp Feature: domain Description: Psu Location: 962252-962789 bp Feature: gene Location: 962859-963008 bp Feature: gene Location: 963129-964538 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 963366-963978 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 963366-963978 bp Feature: gene Location: 964637-965374 bp Feature: domain Description: SLATT_5 Location: 964736-965342 bp Feature: domain Description: SLATT_5 Location: 964736-965342 bp Feature: gene Location: 965391-966569 bp Feature: domain Description: PRK09692 Location: 965400-966552 bp Feature: domain Description: PRK09692 Location: 965400-966552 bp Feature: gene Location: 986048-986764 bp Feature: domain Description: rph Location: 986051-986759 bp Feature: domain Description: rph Location: 986051 -986759 bp Feature: gene Location: 986815-987471 bp Feature: domain Description: pyrE Location: 986833-987466 bp Feature: domain Description: pyrE Location: 986833-987466 bp Feature: gene Location: 987769-988728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 987904-988450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 987904-988450 bp Feature: gene Location: 988772-989368 bp Feature: domain Description: slmA Location: 988778-989354 bp Feature: domain Description: slmA Location: 988778-989354 bp Feature: gene Location: 989475-989933 bp Feature: domain Description: dut Location: 989481-989928 bp Feature: domain Description: dut Location: 989481 -989928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional), rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: JABXTA010000004.1 Escherichia fergusonii strain RHB30-C01 RHB30-C01_4, whole genome shotgun sequence (760137 bp)
Overview 1 RT 1: 141301-146010 bp Neighborhood of RT #1 [141301, 146900] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 141301-142335 bp Feature: domain Description: Q Location: 141304-142327 bp Feature: domain Description: Q Location: 141304-142 32 7 bp Feature: gene Location: 142374-142535 bp Feature: gene Location: 142730-144274 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 143147-143600 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 143147-143600 bp Feature: gene Location: 144440-144700 bp Feature: gene Location: 144762-146900 bp Feature: domain Description: Phage_GPA Location: 145023-146010 bp Feature: domain Description: Phage_GPA Location: 14502 3-146010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)