myRT

myRT report for GCA_014117665.1_ASM1411766v1

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Seq: JACGZR010000019.1 Escherichia coli strain 54882 54882_contig_19, whole genome shotgun sequence (165848 bp)
Overview 1 RT 1: 137160-143191 bp Neighborhood of RT #1 [137160, 143191] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137160-138080 bp Feature: domain Description: AbiEii Location: 137202-137943 bp Feature: domain Description: AbiEii Location: 1 37202-1 37943 bp Feature: gene Location: 138067-138870 bp Feature: domain Description: AbiEi_3_N Location: 138100-138361 bp Feature: domain Description: AbiEi_3_N Location: 1 381 00-1 38361 bp Feature: domain Description: AbiEi_3 Location: 138373-138829 bp Feature: domain Description: AbiEi_3 Location: 1 38373-1 38829 bp Feature: gene Location: 139165-142374 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139693-140182 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 39693-1 401 82 bp Feature: domain Description: nitrilase Location: 141688-142285 bp Feature: domain Description: nitrilase Location: 1 41 688-1 42285 bp Feature: gene Location: 142535-142675 bp Feature: domain Description: Phage_ASH Location: 142562-142655 bp Feature: domain Description: Phage_ASH Location: 1 42562-1 42655 bp Feature: gene Location: 142721-143191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACGZR010000023.1 Escherichia coli strain 54882 54882_contig_23, whole genome shotgun sequence (30981 bp)
Overview 1 RT 1: 9361-13550 bp Neighborhood of RT #1 [9361, 13550] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 9361-10032 bp Feature: domain Description: Plasmid_stab_B Location: 9376-9583 bp Feature: domain Description: Plasmid_stab_B Location: 9376-9583 bp Feature: domain Description: Plasmid_stab_B Location: 9688-9895 bp Feature: domain Description: Plasmid_stab_B Location: 9688-9895 bp Feature: gene Location: 10035-11006 bp Feature: domain Description: StbA Location: 10038-10983 bp Feature: domain Description: StbA Location: 10038-10983 bp Feature: gene Location: 11255-12742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11660-12350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11660-12 350 bp Feature: gene Location: 12748-12915 bp Feature: gene Location: 13155-13550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII