myRT

myRT report for GCA_014117765.1_ASM1411776v1

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Seq: JACHAY010000013.1 Klebsiella pneumoniae strain KKP3 assembly_contig_13, whole genome shotgun sequence (151679 bp)
Overview 1 RT 1: 31974-38827 bp Neighborhood of RT #1 [31974, 38844] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31974-32639 bp Feature: domain Description: INT_P4_C Location: 32079-32637 bp Feature: domain Description: INT_P4_C Location: 32079-32637 bp Feature: gene Location: 32900-33340 bp Feature: domain Description: Integrase_1 Location: 32906-33122 bp Feature: domain Description: Integrase_1 Location: 32906-331 22 bp Feature: gene Location: 33397-35475 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-34249 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33805-34249 bp Feature: gene Location: 35475-38084 bp Feature: domain Description: FimD Location: 35532-38073 bp Feature: domain Description: FimD Location: 35532-38073 bp Feature: gene Location: 38116-38844 bp Feature: domain Description: FimC Location: 38164-38827 bp Feature: domain Description: FimC Location: 381 64-38827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JACHAY010000046.1 Klebsiella pneumoniae strain KKP3 assembly_contig_46, whole genome shotgun sequence (17657 bp)
Overview 1 RT 1: 2915-7940 bp Neighborhood of RT #1 [2915, 7945] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 2915-4186 bp Feature: domain Description: umuC Location: 2918-4178 bp Feature: domain Description: umuC Location: 2 918-4178 bp Feature: gene Location: 4186-4869 bp Feature: domain Description: PRK10276 Location: 4489-4852 bp Feature: domain Description: PRK102 76 Location: 4489-4852 bp Feature: gene Location: 5023-6510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5428-6118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 542 8-6118 bp Feature: gene Location: 6579-6848 bp Feature: gene Location: 6980-7945 bp Feature: domain Description: ArdC Location: 7106-7940 bp Feature: domain Description: ArdC Location: 7106-7940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: JACHAY010000078.1 Klebsiella pneumoniae strain KKP3 assembly_contig_78, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 60-1831 bp Neighborhood of RT #1 [60, 1831] RVT-GII Feature: gene Location: 60-1544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1152 bp Feature: gene Location: 1598-1831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII