myRT

myRT report for GCA_014122145.1_ASM1412214v1

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Seq: JACHTB010000012.1 Salmonella enterica subsp. enterica serovar Brandenburg strain BCMOA-B-TMB-01 NODE_12_length_151306_cov_24.913925, whole genome shotgun sequence (151306 bp)
Overview 1 RT 1: 59904-63307 bp Neighborhood of RT #1 [59904, 63307] DDE_3 HTH_23 RVT-Retrons Feature: gene Location: 59904-60524 bp Feature: domain Description: DDE_3 Location: 60024-60441 bp Feature: domain Description: DDE_3 Location: 60024-60441 bp Feature: gene Location: 60531-60935 bp Feature: domain Description: HTH_23 Location: 60624-60750 bp Feature: domain Description: HTH_23 Location: 60624-60750 bp Feature: gene Location: 61078-62058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61261-61810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 61 261 -61 81 0 bp Feature: gene Location: 62084-62281 bp Feature: gene Location: 62348-63307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), HTH_23 (pfam13384), RVT-Retrons

Seq: JACHTB010000002.1 Salmonella enterica subsp. enterica serovar Brandenburg strain BCMOA-B-TMB-01 NODE_2_length_610245_cov_24.545123, whole genome shotgun sequence (610245 bp)
Overview 1 RT 1: 188300-190636 bp Neighborhood of RT #1 [188300, 190636] HTH_XRE RVT-Retrons Feature: gene Location: 188300-188599 bp Feature: gene Location: 188636-188944 bp Feature: domain Description: HTH_XRE Location: 188648-188813 bp Feature: domain Description: HTH_XRE Location: 188648-188813 bp Feature: gene Location: 188922-189872 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 189102-189645 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 189102 -189645 bp Feature: gene Location: 190012-190443 bp Feature: gene Location: 190442-190636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons