myRT

myRT report for GCA_014129535.1_ASM1412953v1

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Seq: JAATLE010000001.1 Wolbachia pipientis isolate wNeo wNeo_scaffold11, whole genome shotgun sequence (53343 bp)
Overview 1 RT 1: 21301-29431 bp 2 RT 2: 36158-37980 bp Neighborhood of RT #1 [21301, 29431] MidA KOG4768 RVT-GII Intron_maturas2 RVT-GII RVT_N RVT-GII GIIM HNHc CcmF WPE_wolbac CcmF Neighborhood of RT #2 [36158, 37980] PDDEXK_2 RVT_N RVT-GII DUF5372 Feature: gene Location: 21301-22350 bp Feature: domain Description: MidA Location: 21313-22342 bp Feature: domain Description: MidA Location: 21 31 3-22342 bp Feature: gene Location: 22505-22717 bp Feature: domain Description: KOG4768 Location: 22514-22706 bp Feature: domain Description: KOG4768 Location: 2251 4-22706 bp Feature: gene Location: 22743-23411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22749-22908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22749-22908 bp Feature: domain Description: Intron_maturas2 Location: 23004-23265 bp Feature: domain Description: Intron_maturas2 Location: 23004-23265 bp Feature: gene Location: 23460-23690 bp Feature: gene Location: 23813-23959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23816-23954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2381 6-23954 bp Feature: gene Location: 24094-24300 bp Feature: gene Location: 24710-26440 bp Feature: domain Description: RVT_N Location: 24713-24863 bp Feature: domain Description: RVT_N Location: 2471 3-24863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24908-25619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24908-2561 9 bp Feature: domain Description: GIIM Note: maturase Location: 25709-25925 bp Feature: domain Description: GIIM Note: maturase Location: 25709-25925 bp Feature: domain Description: HNHc Note: nucleases Location: 26129-26264 bp Feature: domain Description: HNHc Note: nucleases Location: 261 29-26264 bp Feature: gene Location: 27238-29343 bp Feature: domain Description: CcmF Location: 27244-27532 bp Feature: domain Description: CcmF Location: 27244-27532 bp Feature: domain Description: WPE_wolbac Location: 27574-27679 bp Feature: domain Description: WPE_wolbac Location: 27574-27679 bp Feature: domain Description: CcmF Location: 27700-29314 bp Feature: domain Description: CcmF Location: 27700-2931 4 bp Feature: gene Location: 29243-29431 bp Feature: gene Location: 36158-36601 bp Feature: domain Description: PDDEXK_2 Location: 36185-36404 bp Feature: domain Description: PDDEXK_2 Location: 361 85-36404 bp Feature: gene Location: 36841-36984 bp Feature: gene Location: 37022-37534 bp Feature: domain Description: RVT_N Location: 37073-37316 bp Feature: domain Description: RVT_N Location: 37073-3731 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37361-37424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37361 -37424 bp Feature: gene Location: 37536-37706 bp Feature: domain Description: DUF5372 Location: 37560-37683 bp Feature: domain Description: DUF5372 Location: 37560-37683 bp Feature: gene Location: 37750-37980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MidA (COG1565), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), CcmF (COG1138), WPE_wolbac (TIGR02697), PDDEXK_2 (pfam12784)
DUF5372 (pfam17342)

Seq: JAATLE010000011.1 Wolbachia pipientis isolate wNeo wNeo_scaffold2, whole genome shotgun sequence (154325 bp)
Overview 1 RT 1: 64939-68953 bp 2 RT 2: 123635-128474 bp Neighborhood of RT #1 [64939, 69036] PDDEXK_2 RVT-GII PDDEXK_2 T_den_put_tspse Porin_4 Neighborhood of RT #2 [123635, 128474] KOG4768 GIIM HNHc RVT_N RVT-GII Intron_maturas2 RVT-GII RVT-GII Feature: gene Location: 64939-65796 bp Feature: domain Description: PDDEXK_2 Location: 64966-65659 bp Feature: domain Description: PDDEXK_2 Location: 64966-65659 bp Feature: gene Location: 65842-66087 bp Feature: gene Location: 66140-66274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66143-66260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66143-662 60 bp Feature: gene Location: 66910-67776 bp Feature: domain Description: PDDEXK_2 Location: 67084-67396 bp Feature: domain Description: PDDEXK_2 Location: 67084-67396 bp Feature: domain Description: T_den_put_tspse Location: 67396-67762 bp Feature: domain Description: T_den_put_tspse Location: 67396-67762 bp Feature: gene Location: 67822-69036 bp Feature: domain Description: Porin_4 Location: 68176-68953 bp Feature: domain Description: Porin_4 Location: 68176-68953 bp Feature: gene Location: 123635-123934 bp Feature: domain Description: KOG4768 Location: 123719-123923 bp Feature: domain Description: KOG4768 Location: 12 3719-12 392 3 bp Feature: gene Location: 124137-124727 bp Feature: domain Description: GIIM Note: maturase Location: 124143-124374 bp Feature: domain Description: GIIM Note: maturase Location: 12 4143-12 4374 bp Feature: domain Description: HNHc Note: nucleases Location: 124578-124713 bp Feature: domain Description: HNHc Note: nucleases Location: 12 4578-12 4713 bp Feature: gene Location: 124986-125828 bp Feature: domain Description: RVT_N Location: 125037-125283 bp Feature: domain Description: RVT_N Location: 12 5037-12 52 83 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125325-125775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 532 5-12 5775 bp Feature: gene Location: 126316-126561 bp Feature: domain Description: Intron_maturas2 Location: 126331-126529 bp Feature: domain Description: Intron_maturas2 Location: 12 6331-12 652 9 bp Feature: gene Location: 126585-126842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126591-126750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6591-12 6750 bp Feature: gene Location: 126891-127121 bp Feature: gene Location: 127244-127390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127247-127385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 72 47-12 7385 bp Feature: gene Location: 127525-127731 bp Feature: gene Location: 128241-128474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), RVT-GII, T_den_put_tspse (TIGR01784), Porin_4 (pfam13609), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), Intron_maturas2 (pfam01348)

Seq: JAATLE010000018.1 Wolbachia pipientis isolate wNeo wNeo_scaffold3, whole genome shotgun sequence (158136 bp)
Overview 1 RT 1: 46243-50274 bp 2 RT 2: 66274-70036 bp Neighborhood of RT #1 [46243, 50282] RVT-GII Intron_maturas2 HNHc RVT-GII KOG4768 HTH_Tnp_IS630 Neighborhood of RT #2 [66274, 70077] DUF4096 RVT-GII pcrA PRK06638 Feature: gene Location: 46243-47190 bp Feature: gene Location: 47514-47819 bp Feature: gene Location: 47797-48810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47827-48019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47827-48019 bp Feature: domain Description: Intron_maturas2 Location: 48112-48373 bp Feature: domain Description: Intron_maturas2 Location: 48112-483 73 bp Feature: domain Description: HNHc Note: nucleases Location: 48526-48709 bp Feature: domain Description: HNHc Note: nucleases Location: 48526-48709 bp Feature: gene Location: 48856-49302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48859-49240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48859-49240 bp Feature: gene Location: 49339-49644 bp Feature: domain Description: KOG4768 Location: 49402-49630 bp Feature: domain Description: KOG4768 Location: 49402-4963 0 bp Feature: gene Location: 49947-50282 bp Feature: domain Description: HTH_Tnp_IS630 Location: 50148-50274 bp Feature: domain Description: HTH_Tnp_IS63 0 Location: 50148-50274 bp Feature: gene Location: 66274-66477 bp Feature: domain Description: DUF4096 Location: 66292-66472 bp Feature: domain Description: DUF4096 Location: 66292-66472 bp Feature: gene Location: 66511-66639 bp Feature: gene Location: 67056-67268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67059-67239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67059-6723 9 bp Feature: gene Location: 67423-69339 bp Feature: domain Description: pcrA Location: 67435-69319 bp Feature: domain Description: pcrA Location: 6743 5-693 19 bp Feature: gene Location: 69490-70077 bp Feature: domain Description: PRK06638 Location: 69496-70036 bp Feature: domain Description: PRK0663 8 Location: 69496-7003 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HTH_Tnp_IS630 (pfam01710), DUF4096 (pfam13340), pcrA (TIGR01073), PRK06638 (NADH-quinone oxidoreductase subunit J)

Seq: JAATLE010000019.1 Wolbachia pipientis isolate wNeo wNeo_scaffold4, whole genome shotgun sequence (131129 bp)
Overview 1 RT 1: 98129-102915 bp Neighborhood of RT #1 [98129, 103031] RVT-GII Intron_maturas2 HNHc RVT-GII KOG4768 SMC_prok_B Feature: gene Location: 98129-98263 bp Feature: gene Location: 98789-99736 bp Feature: gene Location: 99773-100726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99803-99995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99803-99995 bp Feature: domain Description: Intron_maturas2 Location: 100088-100349 bp Feature: domain Description: Intron_maturas2 Location: 100088-10034 9 bp Feature: domain Description: HNHc Note: nucleases Location: 100502-100685 bp Feature: domain Description: HNHc Note: nucleases Location: 100502-100685 bp Feature: gene Location: 100772-101218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100775-101156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100775-101156 bp Feature: gene Location: 101255-101560 bp Feature: domain Description: KOG4768 Location: 101318-101546 bp Feature: domain Description: KOG4 768 Location: 101318-10154 6 bp Feature: gene Location: 101970-103031 bp Feature: domain Description: SMC_prok_B Location: 102111-102915 bp Feature: domain Description: SMC_prok_B Location: 102111-102915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), SMC_prok_B (TIGR02168)

Seq: JAATLE010000015.1 Wolbachia pipientis isolate wNeo wNeo_scaffold5, whole genome shotgun sequence (124304 bp)
Overview 1 RT 1: 16140-21680 bp Neighborhood of RT #1 [16140, 21724] PRK05305 group_II_RT_mat RVT-GII RVT-GII PDDEXK_2 recA Feature: gene Location: 16140-16844 bp Feature: domain Description: PRK05305 Location: 16176-16800 bp Feature: domain Description: PRK05 305 Location: 16176-16800 bp Feature: gene Location: 17999-18346 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18086-18314 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 18086-18314 bp Feature: gene Location: 18315-18644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18321-18633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18321-18633 bp Feature: gene Location: 18712-19284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18718-18928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18718-18928 bp Feature: gene Location: 19393-20301 bp Feature: domain Description: PDDEXK_2 Location: 19432-20122 bp Feature: domain Description: PDDEXK_2 Location: 19432-20122 bp Feature: gene Location: 20657-21724 bp Feature: domain Description: recA Location: 20681-21680 bp Feature: domain Description: recA Location: 20681-21680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05305 (phosphatidylserine decarboxylase family protein), group_II_RT_mat (TIGR04416), RVT-GII, PDDEXK_2 (pfam12784), recA (PRK09519)

Seq: JAATLE010000008.1 Wolbachia pipientis isolate wNeo wNeo_scaffold6, whole genome shotgun sequence (109642 bp)
Overview 1 RT 1: 16076-19569 bp 2 RT 2: 93647-98231 bp Neighborhood of RT #1 [16076, 19583] KOG4768 RVT-GII RVT-GII YifB Neighborhood of RT #2 [93647, 98231] KOG4768 RVT-GII RVT-GII KOG4768 Feature: gene Location: 16076-16567 bp Feature: gene Location: 16675-17292 bp Feature: domain Description: KOG4768 Location: 16690-17266 bp Feature: domain Description: KOG476 8 Location: 16 6 90-1726 6 bp Feature: gene Location: 17316-17573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17322-17481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17322-17481 bp Feature: gene Location: 17622-17852 bp Feature: gene Location: 17975-18121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17978-18116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17978-18116 bp Feature: gene Location: 18256-18462 bp Feature: gene Location: 18972-19583 bp Feature: domain Description: YifB Location: 18975-19569 bp Feature: domain Description: YifB Location: 18975-1956 9 bp Feature: gene Location: 93647-93793 bp Feature: gene Location: 94368-94673 bp Feature: domain Description: KOG4768 Location: 94431-94659 bp Feature: domain Description: KOG476 8 Location: 94431-946 59 bp Feature: gene Location: 94710-95156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94713-95094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94713-95094 bp Feature: gene Location: 95193-95507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95232-95424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95232-95424 bp Feature: gene Location: 95750-95956 bp Feature: domain Description: KOG4768 Location: 95759-95930 bp Feature: domain Description: KOG476 8 Location: 95759-95930 bp Feature: gene Location: 96114-98231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, YifB (COG0606)