myRT

myRT report for GCA_014129565.1_ASM1412956v1

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Seq: JAATLF010000008.1 Wolbachia pipientis isolate wOrie wOrie_scaffold1, whole genome shotgun sequence (226633 bp)
Overview 1 RT 1: 38560-41791 bp 2 RT 2: 115352-119013 bp Neighborhood of RT #1 [38560, 41805] RVT-GII KOG4768 YifB Neighborhood of RT #2 [115352, 119013] KOG4768 RVT-GII Feature: gene Location: 38560-38706 bp Feature: gene Location: 39010-39138 bp Feature: gene Location: 39368-39814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39371-39752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39371 -39752 bp Feature: gene Location: 39851-40156 bp Feature: domain Description: KOG4768 Location: 39914-40142 bp Feature: domain Description: KOG4768 Location: 3991 4-401 42 bp Feature: gene Location: 40666-41805 bp Feature: domain Description: YifB Location: 40705-41791 bp Feature: domain Description: YifB Location: 40705-41 791 bp Feature: gene Location: 115352-115498 bp Feature: gene Location: 116550-116855 bp Feature: domain Description: KOG4768 Location: 116613-116841 bp Feature: domain Description: KOG4768 Location: 1 1 661 3-1 1 6841 bp Feature: gene Location: 116892-117338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116895-117276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 6895-1 1 7276 bp Feature: gene Location: 117568-117696 bp Feature: gene Location: 118270-119013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), YifB (COG0606)

Seq: JAATLF010000007.1 Wolbachia pipientis isolate wOrie wOrie_scaffold10, whole genome shotgun sequence (51208 bp)
Overview 1 RT 1: 28321-33873 bp Neighborhood of RT #1 [28321, 33873] Smc KOG4768 RVT-GII RVT-GII Intron_maturas2 KOG4768 Feature: gene Location: 28321-29397 bp Feature: domain Description: Smc Location: 28501-29296 bp Feature: domain Description: Smc Location: 2 8501-2 92 96 bp Feature: gene Location: 29807-30112 bp Feature: domain Description: KOG4768 Location: 29870-30098 bp Feature: domain Description: KOG4768 Location: 2 9870-30098 bp Feature: gene Location: 30149-30595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30152-30533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30152 -30533 bp Feature: gene Location: 30641-31165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30671-30863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30671-30863 bp Feature: domain Description: Intron_maturas2 Location: 30956-31145 bp Feature: domain Description: Intron_maturas2 Location: 30956-31145 bp Feature: gene Location: 31392-31598 bp Feature: domain Description: KOG4768 Location: 31401-31572 bp Feature: domain Description: KOG4768 Location: 31401-31572 bp Feature: gene Location: 31756-33873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Smc (COG1196), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT-GII, Intron_maturas2 (pfam01348)

Seq: JAATLF010000013.1 Wolbachia pipientis isolate wOrie wOrie_scaffold12, whole genome shotgun sequence (45579 bp)
Overview 1 RT 1: 25649-30699 bp Neighborhood of RT #1 [25649, 30710] PRK06638 pcrA RVT-GII PRK06635 Feature: gene Location: 25649-26236 bp Feature: domain Description: PRK06638 Location: 25655-26195 bp Feature: domain Description: PRK0663 8 Location: 25655-26195 bp Feature: gene Location: 26387-28303 bp Feature: domain Description: pcrA Location: 26399-28283 bp Feature: domain Description: pcrA Location: 263 99-28283 bp Feature: gene Location: 28458-28670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28461-28641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28461-28641 bp Feature: gene Location: 29087-29215 bp Feature: gene Location: 29544-30710 bp Feature: domain Description: PRK06635 Location: 29553-30699 bp Feature: domain Description: PRK0663 5 Location: 29553 -3 0699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06638 (NADH-quinone oxidoreductase subunit J), pcrA (TIGR01073), RVT-GII, PRK06635 (aspartate kinase; Reviewed)

Seq: JAATLF010000016.1 Wolbachia pipientis isolate wOrie wOrie_scaffold3, whole genome shotgun sequence (132790 bp)
Overview 1 RT 1: 18198-22703 bp Neighborhood of RT #1 [18198, 22747] group_II_RT_mat RVT-GII RVT-GII PDDEXK_2 recA Feature: gene Location: 18198-18485 bp Feature: gene Location: 19022-19369 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 19109-19337 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 19109-19337 bp Feature: gene Location: 19338-19667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19344-19656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1934 4 -19656 bp Feature: gene Location: 19735-20307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19741-19951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1974 1-19951 bp Feature: gene Location: 20416-21324 bp Feature: domain Description: PDDEXK_2 Location: 20455-21145 bp Feature: domain Description: PDDEXK_2 Location: 204 55-2114 5 bp Feature: gene Location: 21680-22747 bp Feature: domain Description: recA Location: 21704-22703 bp Feature: domain Description: recA Location: 21704 -22703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, PDDEXK_2 (pfam12784), recA (PRK09519)

Seq: JAATLF010000010.1 Wolbachia pipientis isolate wOrie wOrie_scaffold5, whole genome shotgun sequence (103124 bp)
Overview 1 RT 1: 84839-93463 bp 2 RT 2: 100189-102011 bp Neighborhood of RT #1 [84839, 93463] MidA RVT-GII KOG4768 RVT_N RVT-GII GIIM HNHc CcmF WPE_wolbac CcmF Neighborhood of RT #2 [100189, 102011] PDDEXK_2 RVT_N RVT-GII DUF5372 Feature: gene Location: 84839-85231 bp Feature: gene Location: 85312-86361 bp Feature: domain Description: MidA Location: 85324-86353 bp Feature: domain Description: MidA Location: 85 324-8635 3 bp Feature: gene Location: 87544-87990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87547-87928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 875 47-87928 bp Feature: gene Location: 88027-88332 bp Feature: domain Description: KOG4768 Location: 88090-88318 bp Feature: domain Description: KOG4768 Location: 88090-88318 bp Feature: gene Location: 88742-90472 bp Feature: domain Description: RVT_N Location: 88745-88895 bp Feature: domain Description: RVT_N Location: 88745 -88895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88940-89651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88940-8965 1 bp Feature: domain Description: GIIM Note: maturase Location: 89741-89957 bp Feature: domain Description: GIIM Note: maturase Location: 89741-8995 7 bp Feature: domain Description: HNHc Note: nucleases Location: 90161-90296 bp Feature: domain Description: HNHc Note: nucleases Location: 90161-90296 bp Feature: gene Location: 91270-93375 bp Feature: domain Description: CcmF Location: 91276-91564 bp Feature: domain Description: CcmF Location: 91276-915 64 bp Feature: domain Description: WPE_wolbac Location: 91606-91711 bp Feature: domain Description: WPE_wolbac Location: 91606-91711 bp Feature: domain Description: CcmF Location: 91732-93346 bp Feature: domain Description: CcmF Location: 91732-93346 bp Feature: gene Location: 93275-93463 bp Feature: gene Location: 100189-100632 bp Feature: domain Description: PDDEXK_2 Location: 100216-100435 bp Feature: domain Description: PDDEXK_2 Location: 100216-100435 bp Feature: gene Location: 100872-101015 bp Feature: gene Location: 101053-101565 bp Feature: domain Description: RVT_N Location: 101104-101347 bp Feature: domain Description: RVT_N Location: 101104-101347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101392-101455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101392-10145 5 bp Feature: gene Location: 101567-101737 bp Feature: domain Description: DUF5372 Location: 101591-101714 bp Feature: domain Description: DUF5 372 Location: 1015 91-101714 bp Feature: gene Location: 101781-102011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MidA (COG1565), RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507), CcmF (COG1138), WPE_wolbac (TIGR02697), PDDEXK_2 (pfam12784), DUF5372 (pfam17342)

Seq: JAATLF010000002.1 Wolbachia pipientis isolate wOrie wOrie_scaffold8, whole genome shotgun sequence (80610 bp)
Overview 1 RT 1: 49587-54871 bp Neighborhood of RT #1 [49587, 54871] Mg_chelatase_C KOG4768 RVT_N RVT-GII GIIM HNHc Intron_maturas2 RVT-GII KOG4768 Feature: gene Location: 49587-49862 bp Feature: domain Description: Mg_chelatase_C Location: 49593-49848 bp Feature: domain Description: Mg_chelatase_C Location: 49593-49848 bp Feature: gene Location: 50032-50244 bp Feature: domain Description: KOG4768 Location: 50041-50233 bp Feature: domain Description: KOG476 8 Location: 50041-50233 bp Feature: gene Location: 50534-52225 bp Feature: domain Description: RVT_N Location: 50585-50831 bp Feature: domain Description: RVT_N Location: 50585-50831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50873-51566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50873-5156 6 bp Feature: domain Description: GIIM Note: maturase Location: 51641-51872 bp Feature: domain Description: GIIM Note: maturase Location: 516 41-51872 bp Feature: domain Description: HNHc Note: nucleases Location: 52076-52211 bp Feature: domain Description: HNHc Note: nucleases Location: 52076 -52211 bp Feature: gene Location: 52713-53111 bp Feature: domain Description: Intron_maturas2 Location: 52845-53079 bp Feature: domain Description: Intron_maturas2 Location: 52845-53079 bp Feature: gene Location: 53340-53786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53343-53724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53343-53724 bp Feature: gene Location: 53823-54128 bp Feature: domain Description: KOG4768 Location: 53886-54114 bp Feature: domain Description: KOG476 8 Location: 53886 -54114 bp Feature: gene Location: 54638-54871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mg_chelatase_C (pfam13335), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: JAATLF010000003.1 Wolbachia pipientis isolate wOrie wOrie_scaffold9, whole genome shotgun sequence (81217 bp)
Overview 1 RT 1: 66708-69629 bp Neighborhood of RT #1 [66708, 69629] T_den_put_tspse HNHc RVT-GII group_II_RT_mat Feature: gene Location: 66708-67088 bp Feature: domain Description: T_den_put_tspse Location: 66783-67068 bp Feature: domain Description: T_den_put_tspse Location: 667 83-67 068 bp Feature: gene Location: 67115-67438 bp Feature: domain Description: HNHc Note: nucleases Location: 67283-67424 bp Feature: domain Description: HNHc Note: nucleases Location: 67 283-67 424 bp Feature: gene Location: 68419-68862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68596-68836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68596-68836 bp Feature: gene Location: 68930-69130 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 68933-69098 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 68933-69098 bp Feature: gene Location: 69261-69629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), HNHc (smart00507), RVT-GII, group_II_RT_mat (TIGR04416)