myRT

myRT report for GCA_014129645.1_ASM1412964v1

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Seq: JAATLB010000010.1 Wolbachia pipientis isolate wBic wBic_scaffold2, whole genome shotgun sequence (157717 bp)
Overview 1 RT 1: 69345-75821 bp Neighborhood of RT #1 [69345, 75856] PRK01259 ANK Ank_2 RVT-GII GIIM ANK ANK ANK ANK MFS_MdfA_MDR_like Feature: gene Location: 69345-70271 bp Feature: domain Description: PRK01259 Location: 69348-70251 bp Feature: domain Description: PRK01 259 Location: 69348-70251 bp Feature: gene Location: 70575-71270 bp Feature: domain Description: ANK Location: 70620-70920 bp Feature: domain Description: ANK Location: 70620-70920 bp Feature: domain Description: Ank_2 Location: 70953-71166 bp Feature: domain Description: Ank_2 Location: 70953-71 1 66 bp Feature: gene Location: 71320-72570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71524-72181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 524-721 81 bp Feature: domain Description: GIIM Note: maturase Location: 72265-72478 bp Feature: domain Description: GIIM Note: maturase Location: 72265-72478 bp Feature: gene Location: 73240-74520 bp Feature: domain Description: ANK Location: 73273-73615 bp Feature: domain Description: ANK Location: 73273-7361 5 bp Feature: domain Description: ANK Location: 73624-73879 bp Feature: domain Description: ANK Location: 73624-73879 bp Feature: domain Description: ANK Location: 73981-74254 bp Feature: domain Description: ANK Location: 73981 -74254 bp Feature: domain Description: ANK Location: 74290-74362 bp Feature: domain Description: ANK Location: 74290-74362 bp Feature: gene Location: 74654-75856 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 74690-75821 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 74690-75821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01259 (ribose-phosphate diphosphokinase), ANK (smart00248), Ank_2 (pfam12796), RVT-GII, GIIM (pfam08388), MFS_MdfA_MDR_like (cd17320)

Seq: JAATLB010000001.1 Wolbachia pipientis isolate wBic wBic_scaffold20, whole genome shotgun sequence (8432 bp)
Overview 1 RT 1: 4707-8203 bp Neighborhood of RT #1 [4707, 8217] T_den_put_tspse RVT-GII GIIM HNHc RVT-GII RVT_N PDDEXK_2 Feature: gene Location: 4707-5048 bp Feature: gene Location: 5263-5643 bp Feature: domain Description: T_den_put_tspse Location: 5338-5623 bp Feature: domain Description: T_den_put_tspse Location: 5338-562 3 bp Feature: gene Location: 5670-6572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5691-5910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5691-5910 bp Feature: domain Description: GIIM Note: maturase Location: 6003-6219 bp Feature: domain Description: GIIM Note: maturase Location: 6003-62 19 bp Feature: domain Description: HNHc Note: nucleases Location: 6417-6552 bp Feature: domain Description: HNHc Note: nucleases Location: 6417-6552 bp Feature: gene Location: 6641-6937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6644-6866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6644-6866 bp Feature: gene Location: 7010-7345 bp Feature: RT Description: RVT_N Location: 7061-7307 bp Feature: RT Description: RVT_N Location: 7061-7307 bp Feature: gene Location: 7810-8217 bp Feature: domain Description: PDDEXK_2 Location: 7894-8203 bp Feature: domain Description: PDDEXK_2 Location: 7894-82 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), PDDEXK_2 (pfam12784)

Seq: JAATLB010000008.1 Wolbachia pipientis isolate wBic wBic_scaffold4, whole genome shotgun sequence (73074 bp)
Overview 1 RT 1: 57288-69923 bp Neighborhood of RT #1 [57288, 69955] PRK00885 PAZ_siRNAbind PAZ_siRNAbind PAZ_siRNAbind PAZ_siRNAbind PAZ_siRNAbind RVT-GII GIIM KOG4177 ANK TktA rpsD iscX_yfhJ RVT-GII GIIM DciA Feature: gene Location: 57288-58559 bp Feature: domain Description: PRK00885 Location: 57291-58554 bp Feature: domain Description: PRK00885 Location: 57291-58554 bp Feature: gene Location: 59300-61177 bp Feature: domain Description: PAZ_siRNAbind Location: 59537-59672 bp Feature: domain Description: PAZ_siRNAbind Location: 5953 7-59672 bp Feature: domain Description: PAZ_siRNAbind Location: 59831-59960 bp Feature: domain Description: PAZ_siRNAbind Location: 5983 1-59960 bp Feature: domain Description: PAZ_siRNAbind Location: 59975-60095 bp Feature: domain Description: PAZ_siRNAbind Location: 59975-60095 bp Feature: domain Description: PAZ_siRNAbind Location: 60401-60530 bp Feature: domain Description: PAZ_siRNAbind Location: 60401-6053 0 bp Feature: domain Description: PAZ_siRNAbind Location: 60548-60671 bp Feature: domain Description: PAZ_siRNAbind Location: 60548-60671 bp Feature: gene Location: 61668-62918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61872-62529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61872-62529 bp Feature: domain Description: GIIM Note: maturase Location: 62613-62826 bp Feature: domain Description: GIIM Note: maturase Location: 62613 -62826 bp Feature: gene Location: 63019-63936 bp Feature: domain Description: KOG4177 Location: 63022-63103 bp Feature: domain Description: KOG4177 Location: 63 022-63 103 bp Feature: domain Description: ANK Location: 63148-63499 bp Feature: domain Description: ANK Location: 63 148-63 499 bp Feature: gene Location: 64196-66247 bp Feature: domain Description: TktA Location: 64208-66224 bp Feature: domain Description: TktA Location: 64208-66224 bp Feature: gene Location: 66304-66975 bp Feature: domain Description: rpsD Location: 66364-66973 bp Feature: domain Description: rpsD Location: 663 64-66973 bp Feature: gene Location: 67102-67302 bp Feature: domain Description: iscX_yfhJ Location: 67108-67291 bp Feature: domain Description: iscX_yfhJ Location: 67108-67291 bp Feature: gene Location: 67868-69118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68072-68729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68072-68729 bp Feature: domain Description: GIIM Note: maturase Location: 68813-69026 bp Feature: domain Description: GIIM Note: maturase Location: 68813 -69026 bp Feature: gene Location: 69474-69644 bp Feature: gene Location: 69677-69955 bp Feature: domain Description: DciA Location: 69698-69923 bp Feature: domain Description: DciA Location: 69698-69923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00885 (phosphoribosylamine--glycine ligase; Provisional), PAZ_siRNAbind (pfam12212), RVT-GII, GIIM (pfam08388), KOG4177 (KOG4177, Ankyrin ), ANK (smart00248), TktA (COG0021), rpsD (PRK05327), iscX_yfhJ (TIGR03412), DciA

Seq: JAATLB010000007.1 Wolbachia pipientis isolate wBic wBic_scaffold7, whole genome shotgun sequence (60230 bp)
Overview 1 RT 1: 12289-22275 bp Neighborhood of RT #1 [12289, 22280] rnhA TIGR02099 AsmA_2 DUF3971 AsmA_2 RVT_N RVT-GII pcrA RVT-GII DUF4096 Feature: gene Location: 12289-12726 bp Feature: domain Description: rnhA Location: 12301-12715 bp Feature: domain Description: rnhA Location: 12301-12715 bp Feature: gene Location: 12719-15841 bp Feature: domain Description: TIGR02099 Location: 12857-13109 bp Feature: domain Description: TIGR02099 Location: 12857-13109 bp Feature: domain Description: AsmA_2 Location: 13712-13850 bp Feature: domain Description: AsmA_2 Location: 13712-13850 bp Feature: domain Description: DUF3971 Location: 13883-14576 bp Feature: domain Description: DUF3971 Location: 13883-14 576 bp Feature: domain Description: AsmA_2 Location: 15086-15689 bp Feature: domain Description: AsmA_2 Location: 15086-15689 bp Feature: gene Location: 15927-16670 bp Feature: RT Description: RVT_N Location: 15993-16239 bp Feature: RT Description: RVT_N Location: 15993-16239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16281-16641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16281-1664 1 bp Feature: gene Location: 16723-16902 bp Feature: gene Location: 17138-17749 bp Feature: gene Location: 18758-19087 bp Feature: gene Location: 19215-21131 bp Feature: domain Description: pcrA Location: 19227-21111 bp Feature: domain Description: pcrA Location: 19227-21111 bp Feature: gene Location: 21286-21498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21289-21484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21289-214 84 bp Feature: gene Location: 21915-22043 bp Feature: gene Location: 22077-22280 bp Feature: domain Description: DUF4096 Location: 22095-22275 bp Feature: domain Description: DUF4 096 Location: 22095-22275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rnhA (PRK13907), TIGR02099 (TIGR02099 family protein), AsmA_2 (pfam13502), DUF3971 (pfam13116), RVT_N (pfam13655), RVT-GII, pcrA (TIGR01073), DUF4096 (pfam13340)

Seq: JAATLB010000012.1 Wolbachia pipientis isolate wBic wBic_scaffold8, whole genome shotgun sequence (53407 bp)
Overview 1 RT 1: 13527-17767 bp Neighborhood of RT #1 [13527, 17808] groEL RVT-GII GIIM HNHc InsE Feature: gene Location: 13527-15176 bp Feature: domain Description: groEL Location: 13530-15165 bp Feature: domain Description: groEL Location: 135 30-15 165 bp Feature: gene Location: 15190-15336 bp Feature: gene Location: 15651-16076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15681-16029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 681-16029 bp Feature: gene Location: 16244-16774 bp Feature: domain Description: GIIM Note: maturase Location: 16253-16439 bp Feature: domain Description: GIIM Note: maturase Location: 1625 3-16439 bp Feature: domain Description: HNHc Note: nucleases Location: 16625-16766 bp Feature: domain Description: HNHc Note: nucleases Location: 16625 -16766 bp Feature: gene Location: 17506-17808 bp Feature: domain Description: InsE Location: 17515-17767 bp Feature: domain Description: InsE Location: 175 15 -17767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT-GII, GIIM (pfam08388), HNHc (smart00507), InsE (COG2963)