myRT

myRT report for GCA_014129685.1_ASM1412968v1

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Seq: JAATLC010000002.1 Wolbachia pipientis isolate wBif wBif_scaffold11, whole genome shotgun sequence (31337 bp)
Overview 1 RT 1: 17131-20793 bp Neighborhood of RT #1 [17131, 20793] COG3293 GIIM RVT-GII Feature: gene Location: 17131-17346 bp Feature: domain Description: COG3293 Location: 17161-17344 bp Feature: domain Description: COG3293 Location: 1 71 61 -1 7344 bp Feature: gene Location: 17800-18141 bp Feature: domain Description: GIIM Note: maturase Location: 17818-18037 bp Feature: domain Description: GIIM Note: maturase Location: 1 781 8-1 8037 bp Feature: gene Location: 18150-19118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18435-19074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8435-1 9074 bp Feature: gene Location: 19457-19984 bp Feature: gene Location: 20164-20793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3293 (Transposase ), GIIM (pfam08388), RVT-GII

Seq: JAATLC010000010.1 Wolbachia pipientis isolate wBif wBif_scaffold12, whole genome shotgun sequence (27525 bp)
Overview 1 RT 1: 9011-16892 bp 2 RT 2: 24206-27415 bp Neighborhood of RT #1 [9011, 16892] HTH_29 rve RVT-GII Neighborhood of RT #2 [24206, 27504] Pat17_PNPLA8_PNPLA9_like2 PLDc_Nuc RVT_N RVT-GII GIIM HNHc Feature: gene Location: 9011-9361 bp Feature: gene Location: 9760-10857 bp Feature: domain Description: HTH_29 Location: 9805-9988 bp Feature: domain Description: HTH_2 9 Location: 9805-9988 bp Feature: domain Description: rve Location: 10252-10621 bp Feature: domain Description: rve Location: 102 52 -1062 1 bp Feature: gene Location: 11054-11302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11057-11273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11057-112 73 bp Feature: gene Location: 11327-16291 bp Feature: gene Location: 16554-16892 bp Feature: gene Location: 24206-25216 bp Feature: domain Description: Pat17_PNPLA8_PNPLA9_like2 Location: 24302-25211 bp Feature: domain Description: Pat17_PNPLA8_PNPLA9_like2 Location: 2 4302 -2 52 11 bp Feature: gene Location: 25149-25646 bp Feature: domain Description: PLDc_Nuc Location: 25203-25620 bp Feature: domain Description: PLDc_Nuc Location: 2 52 03-2 562 0 bp Feature: gene Location: 25678-27504 bp Feature: domain Description: RVT_N Location: 25777-26023 bp Feature: domain Description: RVT_N Location: 2 5777-2 602 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26065-26770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6065-2 6770 bp Feature: domain Description: GIIM Note: maturase Location: 26854-27076 bp Feature: domain Description: GIIM Note: maturase Location: 2 6854-2 7076 bp Feature: domain Description: HNHc Note: nucleases Location: 27274-27415 bp Feature: domain Description: HNHc Note: nucleases Location: 2 72 74-2 7415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), rve (pfam00665), RVT-GII, Pat17_PNPLA8_PNPLA9_like2 (cd07215), PLDc_Nuc (cd09170), RVT_N (pfam13655), GIIM (pfam08388), HNHc (smart00507)

Seq: JAATLC010000001.1 Wolbachia pipientis isolate wBif wBif_scaffold4, whole genome shotgun sequence (138150 bp)
Overview 1 RT 1: 118678-124515 bp Neighborhood of RT #1 [118678, 124535] infA Mplasa_alph_rch RVT-GII GIIM DUF2207 ANK ANK Feature: gene Location: 118678-118941 bp Feature: domain Description: infA Location: 118702-118912 bp Feature: domain Description: infA Location: 118702-118912 bp Feature: gene Location: 119054-121453 bp Feature: domain Description: Mplasa_alph_rch Location: 120212-120596 bp Feature: domain Description: Mplasa_alph_rch Location: 120212-120596 bp Feature: gene Location: 121303-122634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121579-122218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121579-122218 bp Feature: domain Description: GIIM Note: maturase Location: 122290-122509 bp Feature: domain Description: GIIM Note: maturase Location: 122290-122509 bp Feature: gene Location: 122931-123542 bp Feature: domain Description: DUF2207 Location: 123000-123426 bp Feature: domain Description: DUF2207 Location: 123 000-123 426 bp Feature: gene Location: 123729-124535 bp Feature: domain Description: ANK Location: 123786-124107 bp Feature: domain Description: ANK Location: 123 786-124107 bp Feature: domain Description: ANK Location: 124143-124515 bp Feature: domain Description: ANK Location: 124143 -124515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT infA (TIGR00008), Mplasa_alph_rch (TIGR04523), RVT-GII, GIIM (pfam08388), DUF2207 (pfam09972), ANK (smart00248)

Seq: JAATLC010000012.1 Wolbachia pipientis isolate wBif wBif_scaffold5, whole genome shotgun sequence (122861 bp)
Overview 1 RT 1: 45575-50264 bp Neighborhood of RT #1 [45575, 50264] KOG1335 recomb_XerC RVT-GII GIIM group_II_RT_mat Feature: gene Location: 45575-46954 bp Feature: domain Description: KOG1335 Location: 45581-46946 bp Feature: domain Description: KOG1335 Location: 4 5581-4 694 6 bp Feature: gene Location: 47041-47880 bp Feature: domain Description: recomb_XerC Location: 47047-47851 bp Feature: domain Description: recomb_XerC Location: 4 704 7-4 7851 bp Feature: gene Location: 48358-49161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48361-48745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 8361-4 874 5 bp Feature: domain Description: GIIM Note: maturase Location: 48817-49036 bp Feature: domain Description: GIIM Note: maturase Location: 4 8817-4 9036 bp Feature: gene Location: 49254-49628 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 49368-49545 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 9368-4 954 5 bp Feature: gene Location: 50118-50264 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1335 (KOG1335, Dihydrolipoamide dehydrogenase ), recomb_XerC (TIGR02224), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: JAATLC010000004.1 Wolbachia pipientis isolate wBif wBif_scaffold7, whole genome shotgun sequence (70296 bp)
Overview 1 RT 1: 34272-40533 bp Neighborhood of RT #1 [34272, 40637] gatB NB-ARC ANK ANK RVT-GII COG3293 GIIM Feature: gene Location: 34272-35696 bp Feature: domain Description: gatB Location: 34281-35688 bp Feature: domain Description: gatB Location: 34281-35 688 bp Feature: gene Location: 35838-38540 bp Feature: domain Description: NB-ARC Location: 36753-37314 bp Feature: domain Description: NB-ARC Location: 3675 3-37314 bp Feature: domain Description: ANK Location: 37944-38262 bp Feature: domain Description: ANK Location: 37944-38262 bp Feature: domain Description: ANK Location: 38262-38520 bp Feature: domain Description: ANK Location: 38262-385 20 bp Feature: gene Location: 39031-39480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39316-39454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39316-3945 4 bp Feature: gene Location: 39845-40234 bp Feature: domain Description: COG3293 Location: 39923-40220 bp Feature: domain Description: COG3293 Location: 39923-40220 bp Feature: gene Location: 40296-40637 bp Feature: domain Description: GIIM Note: maturase Location: 40314-40533 bp Feature: domain Description: GIIM Note: maturase Location: 40314-405 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gatB (TIGR00133), NB-ARC (pfam00931), ANK (smart00248), RVT-GII, COG3293 (Transposase ), GIIM (pfam08388)

Seq: JAATLC010000014.1 Wolbachia pipientis isolate wBif wBif_scaffold8, whole genome shotgun sequence (63623 bp)
Overview 1 RT 1: 24843-28204 bp Neighborhood of RT #1 [24843, 28204] RVT-GII pcrA Feature: gene Location: 24843-24977 bp Feature: gene Location: 25003-25224 bp Feature: gene Location: 25411-25599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25417-25570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25417-25570 bp Feature: gene Location: 25754-27670 bp Feature: domain Description: pcrA Location: 25766-27650 bp Feature: domain Description: pcrA Location: 2576 6 -276 50 bp Feature: gene Location: 27791-28204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, pcrA (TIGR01073)