myRT

myRT report for GCA_014132355.1_ASM1413235v1

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Seq: BLZO01000004.1 Okeania sp. KiyG1 DNA, sequence004, whole genome shotgun sequence (26464 bp)
Overview 1 RT 1: 14605-20508 bp Neighborhood of RT #1 [14605, 20508] psbA psbA RVT-GII GIIM HNHc group_II_RT_mat RVT-GII RVT_N Feature: gene Location: 14605-15666 bp Feature: domain Description: psbA Location: 14608-15658 bp Feature: domain Description: psbA Location: 1 4608-1 5658 bp Feature: gene Location: 16313-17374 bp Feature: domain Description: psbA Location: 16316-17366 bp Feature: domain Description: psbA Location: 1 631 6-1 7366 bp Feature: gene Location: 18059-19189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18065-18437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8065-1 8437 bp Feature: domain Description: GIIM Note: maturase Location: 18509-18713 bp Feature: domain Description: GIIM Note: maturase Location: 1 8509-1 871 3 bp Feature: domain Description: HNHc Note: nucleases Location: 18902-19058 bp Feature: domain Description: HNHc Note: nucleases Location: 1 8902-1 9058 bp Feature: gene Location: 19297-19698 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 19303-19462 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 9303-1 9462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19504-19660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9504-1 9660 bp Feature: gene Location: 19709-20011 bp Feature: RT Description: RVT_N Location: 19877-19949 bp Feature: RT Description: RVT_N Location: 1 9877-1 9949 bp Feature: gene Location: 20260-20508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT psbA (TIGR01151), RVT-GII, GIIM (pfam08388), HNHc (smart00507), group_II_RT_mat (TIGR04416), RVT_N (pfam13655)

Seq: BLZO01000022.1 Okeania sp. KiyG1 DNA, sequence022, whole genome shotgun sequence (22717 bp)
Overview 1 RT 1: 3444-7527 bp Neighborhood of RT #1 [3444, 7527] DDE_Tnp_ISAZ013 RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 3444-4016 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 3447-4002 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 3447-4002 bp Feature: gene Location: 4398-4688 bp Feature: gene Location: 5252-5773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5264-5432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 64-5432 bp Feature: domain Description: GIIM Note: maturase Location: 5507-5738 bp Feature: domain Description: GIIM Note: maturase Location: 5507-5738 bp Feature: gene Location: 5911-6696 bp Feature: RT Description: RVT_N Location: 6028-6271 bp Feature: RT Description: RVT_N Location: 602 8-62 71 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6319-6658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6319-6658 bp Feature: gene Location: 6923-7084 bp Feature: gene Location: 7279-7527 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655)

Seq: BLZO01000024.1 Okeania sp. KiyG1 DNA, sequence024, whole genome shotgun sequence (92460 bp)
Overview 1 RT 1: 65929-70763 bp Neighborhood of RT #1 [65929, 70763] Glyco_transf_7C GT2_Chondriotin_Pol_N Glyco_transf_7C RVT_N RVT-GII GIIM Feature: gene Location: 65929-66507 bp Feature: domain Description: Glyco_transf_7C Location: 66049-66196 bp Feature: domain Description: Glyco_transf_7C Location: 66049-66196 bp Feature: gene Location: 66857-67546 bp Feature: domain Description: GT2_Chondriotin_Pol_N Location: 66998-67133 bp Feature: domain Description: GT2_Chondriotin_Pol_N Location: 66998-6713 3 bp Feature: domain Description: Glyco_transf_7C Location: 67226-67376 bp Feature: domain Description: Glyco_transf_7C Location: 67226-673 76 bp Feature: gene Location: 68121-69545 bp Feature: RT Description: RVT_N Location: 68166-68346 bp Feature: RT Description: RVT_N Location: 68166-683 46 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68424-69078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68424-69078 bp Feature: domain Description: GIIM Note: maturase Location: 69156-69390 bp Feature: domain Description: GIIM Note: maturase Location: 69156-693 90 bp Feature: gene Location: 70202-70462 bp Feature: gene Location: 70599-70763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_transf_7C (pfam02709), GT2_Chondriotin_Pol_N (cd06420), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: BLZO01000028.1 Okeania sp. KiyG1 DNA, sequence028, whole genome shotgun sequence (63420 bp)
Overview 1 RT 1: 12410-16378 bp Neighborhood of RT #1 [12410, 16378] TIGR03792 PRK00702 RVT_N RVT-GII GIIM McrA RpiA Feature: gene Location: 12410-12742 bp Feature: domain Description: TIGR03792 Location: 12416-12680 bp Feature: domain Description: TIGR03792 Location: 124 16-12680 bp Feature: gene Location: 12844-13200 bp Feature: domain Description: PRK00702 Location: 12871-13180 bp Feature: domain Description: PRK00702 Location: 12871-13180 bp Feature: gene Location: 13771-15780 bp Feature: RT Description: RVT_N Location: 13939-14182 bp Feature: RT Description: RVT_N Location: 13939-14 182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14290-14950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 290-14 950 bp Feature: domain Description: GIIM Note: maturase Location: 15022-15256 bp Feature: domain Description: GIIM Note: maturase Location: 15022-15256 bp Feature: domain Description: McrA Location: 15295-15628 bp Feature: domain Description: McrA Location: 15295-15628 bp Feature: gene Location: 15816-16178 bp Feature: domain Description: RpiA Location: 15819-16140 bp Feature: domain Description: RpiA Location: 15819-1614 0 bp Feature: gene Location: 16205-16378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03792 (uncharacterized cyanobacterial protein, TIGR03792 family), PRK00702 (ribose-5-phosphate isomerase RpiA), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), RpiA (COG0120)

Seq: BLZO01000043.1 Okeania sp. KiyG1 DNA, sequence043, whole genome shotgun sequence (76607 bp)
Overview 1 RT 1: 54263-56295 bp Neighborhood of RT #1 [54263, 56295] RVT-DGRs Feature: gene Location: 54263-54487 bp Feature: gene Location: 54634-54822 bp Feature: gene Location: 54912-55625 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 54942-55422 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 4942-5 5 422 bp Feature: gene Location: 55744-56145 bp Feature: gene Location: 56164-56295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: BLZO01000047.1 Okeania sp. KiyG1 DNA, sequence047, whole genome shotgun sequence (51573 bp)
Overview 1 RT 1: 1747-6320 bp Neighborhood of RT #1 [1747, 6325] RVT_N RVT-GII GIIM dam DinB Feature: gene Location: 1747-2013 bp Feature: gene Location: 2171-3571 bp Feature: RT Description: RVT_N Location: 2213-2435 bp Feature: RT Description: RVT_N Location: 2213-2435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2477-3149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2477-3149 bp Feature: domain Description: GIIM Note: maturase Location: 3248-3482 bp Feature: domain Description: GIIM Note: maturase Location: 3248-3482 bp Feature: gene Location: 4398-4943 bp Feature: domain Description: dam Location: 4419-4932 bp Feature: domain Description: dam Location: 4419-4932 bp Feature: gene Location: 5822-6325 bp Feature: domain Description: DinB Location: 5834-6320 bp Feature: domain Description: DinB Location: 5834-6 320 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), dam (TIGR00571), DinB (pfam05163)

Seq: BLZO01000055.1 Okeania sp. KiyG1 DNA, sequence055, whole genome shotgun sequence (56946 bp)
Overview 1 RT 1: 46736-50778 bp Neighborhood of RT #1 [46736, 50778] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 46736-47332 bp Feature: gene Location: 47375-47578 bp Feature: gene Location: 48291-49955 bp Feature: RT Description: RVT_N Location: 48342-48585 bp Feature: RT Description: RVT_N Location: 48342-48585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48627-49251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48627 -49251 bp Feature: domain Description: GIIM Note: maturase Location: 49311-49536 bp Feature: domain Description: GIIM Note: maturase Location: 49311-49536 bp Feature: domain Description: HNHc Note: nucleases Location: 49746-49920 bp Feature: domain Description: HNHc Note: nucleases Location: 497 46-49920 bp Feature: gene Location: 50414-50557 bp Feature: gene Location: 50650-50778 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BLZO01000061.1 Okeania sp. KiyG1 DNA, sequence061, whole genome shotgun sequence (45405 bp)
Overview 1 RT 1: 6926-14692 bp Neighborhood of RT #1 [6926, 14961] NB-ARC RVT_N RVT-GII GIIM McrA PTZ00429 Cthe_2751_like Cthe_2751_like HAD_sEH-N_like Cthe_2751_like Feature: gene Location: 6926-7264 bp Feature: gene Location: 7571-8725 bp Feature: domain Description: NB-ARC Location: 7676-8246 bp Feature: domain Description: NB-ARC Location: 7676-8 246 bp Feature: gene Location: 8817-10673 bp Feature: RT Description: RVT_N Location: 8934-9177 bp Feature: RT Description: RVT_N Location: 8 934-9177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9225-9918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9225-9918 bp Feature: domain Description: GIIM Note: maturase Location: 9990-10224 bp Feature: domain Description: GIIM Note: maturase Location: 9990-10224 bp Feature: domain Description: McrA Location: 10278-10596 bp Feature: domain Description: McrA Location: 10278 -10596 bp Feature: gene Location: 10897-11169 bp Feature: gene Location: 11203-14961 bp Feature: domain Description: PTZ00429 Location: 11749-11854 bp Feature: domain Description: PTZ00429 Location: 11749-118 54 bp Feature: domain Description: Cthe_2751_like Location: 13066-13252 bp Feature: domain Description: Cthe_2751_like Location: 13066-13252 bp Feature: domain Description: Cthe_2751_like Location: 13435-13597 bp Feature: domain Description: Cthe_2751_like Location: 13435-13597 bp Feature: domain Description: HAD_sEH-N_like Location: 13750-14023 bp Feature: domain Description: HAD_sEH-N_like Location: 13750-14023 bp Feature: domain Description: Cthe_2751_like Location: 14467-14692 bp Feature: domain Description: Cthe_2751_like Location: 14467-14692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTZ00429 (beta-adaptin; Provisional), Cthe_2751_like (cl17065), HAD_sEH-N_like (cd02603), NB-ARC (pfam00931), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BLZO01000071.1 Okeania sp. KiyG1 DNA, sequence071, whole genome shotgun sequence (165777 bp)
Overview 1 RT 1: 62689-69623 bp Neighborhood of RT #1 [62689, 70000] PerM Bcp RVT_N RVT-GII GIIM McrA Bcp cyclophilin_TLP40_like HemolysinCabind HemolysinCabind Feature: gene Location: 62689-63567 bp Feature: domain Description: PerM Location: 62698-63553 bp Feature: domain Description: PerM Location: 6269 8-63553 bp Feature: gene Location: 65117-65299 bp Feature: domain Description: Bcp Location: 65120-65291 bp Feature: domain Description: Bcp Location: 65120-6529 1 bp Feature: gene Location: 65411-67318 bp Feature: RT Description: RVT_N Location: 65579-65822 bp Feature: RT Description: RVT_N Location: 65579 -65822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65870-66536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65870-66536 bp Feature: domain Description: GIIM Note: maturase Location: 66608-66842 bp Feature: domain Description: GIIM Note: maturase Location: 66608-66842 bp Feature: domain Description: McrA Location: 66926-67211 bp Feature: domain Description: McrA Location: 669 26-67211 bp Feature: gene Location: 67923-68267 bp Feature: domain Description: Bcp Location: 68034-68250 bp Feature: domain Description: Bcp Location: 68034-68250 bp Feature: gene Location: 68639-70000 bp Feature: domain Description: cyclophilin_TLP40_like Location: 68690-69206 bp Feature: domain Description: cyclophilin_TLP40_like Location: 6869 0-69 206 bp Feature: domain Description: HemolysinCabind Location: 69413-69515 bp Feature: domain Description: HemolysinCabind Location: 69 413-69 515 bp Feature: domain Description: HemolysinCabind Location: 69521-69623 bp Feature: domain Description: HemolysinCabind Location: 69 521-69 623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerM (COG0628), Bcp (COG1225), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), cyclophilin_TLP40_like (cd01924), HemolysinCabind (pfam00353)

Seq: BLZO01000072.1 Okeania sp. KiyG1 DNA, sequence072, whole genome shotgun sequence (108582 bp)
Overview 1 RT 1: 28602-36171 bp 2 RT 2: 70063-75445 bp Neighborhood of RT #1 [28602, 36380] fusion_not_SelD fusion_not_SelD RVT_N RVT-GII GIIM HNH Pur_DNA_glyco NERD Neighborhood of RT #2 [70063, 75445] PRK14948 PRK14948 KOG4555 RVT-Retrons Feature: gene Location: 28602-30956 bp Feature: domain Description: fusion_not_SelD Location: 28641-29139 bp Feature: domain Description: fusion_not_SelD Location: 28641-29139 bp Feature: domain Description: fusion_not_SelD Location: 29397-30843 bp Feature: domain Description: fusion_not_SelD Location: 29397-30843 bp Feature: gene Location: 31841-32002 bp Feature: gene Location: 32097-33896 bp Feature: RT Description: RVT_N Location: 32214-32454 bp Feature: RT Description: RVT_N Location: 32214-32454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32505-33195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32505-33195 bp Feature: domain Description: GIIM Note: maturase Location: 33267-33501 bp Feature: domain Description: GIIM Note: maturase Location: 33267-33501 bp Feature: domain Description: HNH Note: nucleases Location: 33714-33849 bp Feature: domain Description: HNH Note: nucleases Location: 33714-33849 bp Feature: gene Location: 34617-35234 bp Feature: domain Description: Pur_DNA_glyco Location: 34659-35211 bp Feature: domain Description: Pur_DNA_glyco Location: 34659-35211 bp Feature: gene Location: 35658-36380 bp Feature: domain Description: NERD Location: 35826-36171 bp Feature: domain Description: NERD Location: 35826-36171 bp Feature: gene Location: 70063-72102 bp Feature: domain Description: PRK14948 Location: 70066-71947 bp Feature: domain Description: PRK14948 Location: 70066-71947 bp Feature: gene Location: 72319-72651 bp Feature: domain Description: PRK14948 Location: 72331-72616 bp Feature: domain Description: PRK14948 Location: 72331-72616 bp Feature: gene Location: 73202-74941 bp Feature: domain Description: KOG4555 Location: 73259-73427 bp Feature: domain Description: KOG4555 Location: 73259-73427 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73853-74477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 73853-74477 bp Feature: gene Location: 74953-75081 bp Feature: gene Location: 75200-75445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fusion_not_SelD (TIGR04369), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), Pur_DNA_glyco (pfam02245), NERD (pfam08378), PRK14948 (DNA polymerase III subunit gamma/tau), KOG4555 (KOG4555, TPR repeat-containing protein ), RVT-Retrons

Seq: BLZO01000079.1 Okeania sp. KiyG1 DNA, sequence079, whole genome shotgun sequence (79819 bp)
Overview 1 RT 1: 6964-10783 bp Neighborhood of RT #1 [6964, 10783] PRK00110 His_Phos_1 RVT-GII GIIM HNHc RVT_N Feature: gene Location: 6964-7743 bp Feature: domain Description: PRK00110 Location: 6985-7726 bp Feature: domain Description: PRK0011 0 Location: 6985-7726 bp Feature: gene Location: 8050-8379 bp Feature: domain Description: His_Phos_1 Location: 8089-8338 bp Feature: domain Description: His_Phos_1 Location: 8089-8338 bp Feature: gene Location: 8480-10012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8555-9245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8555-9245 bp Feature: domain Description: GIIM Note: maturase Location: 9317-9551 bp Feature: domain Description: GIIM Note: maturase Location: 9317-9551 bp Feature: domain Description: HNHc Note: nucleases Location: 9740-9896 bp Feature: domain Description: HNHc Note: nucleases Location: 9740-9896 bp Feature: gene Location: 10036-10395 bp Feature: RT Description: RVT_N Location: 10204-10393 bp Feature: RT Description: RVT_N Location: 10204-10393 bp Feature: gene Location: 10622-10783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), PRK00110 (YebC/PmpR family DNA-binding transcriptional regulator), His_Phos_1 (pfam00300), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BLZO01000088.1 Okeania sp. KiyG1 DNA, sequence088, whole genome shotgun sequence (68268 bp)
Overview 1 RT 1: 1-5029 bp Neighborhood of RT #1 [1, 5029] InsQ RVT-GII GIIM HNH RVT_N RVT-GII Feature: gene Location: 1-225 bp Feature: domain Description: InsQ Location: 4-127 bp Feature: domain Description: InsQ Location: 4-12 7 bp Feature: gene Location: 673-1671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682-811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682-811 bp Feature: domain Description: GIIM Note: maturase Location: 886-1117 bp Feature: domain Description: GIIM Note: maturase Location: 886-1117 bp Feature: domain Description: HNH Note: nucleases Location: 1327-1462 bp Feature: domain Description: HNH Note: nucleases Location: 1327-1462 bp Feature: gene Location: 1676-2686 bp Feature: RT Description: RVT_N Location: 1844-2087 bp Feature: RT Description: RVT_N Location: 1844-2087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2135-2651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2135-2651 bp Feature: gene Location: 3323-3583 bp Feature: gene Location: 4685-5029 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: BLZO01000089.1 Okeania sp. KiyG1 DNA, sequence089, whole genome shotgun sequence (160410 bp)
Overview 1 RT 1: 153394-159747 bp Neighborhood of RT #1 [153394, 159758] RVT_N RVT-GII RVT-GII GIIM GIIM HNH DLP_2 McrA RVT-GII RVT-GII Feature: gene Location: 153394-153612 bp Feature: gene Location: 153862-154071 bp Feature: gene Location: 154927-155373 bp Feature: RT Description: RVT_N Location: 154978-155221 bp Feature: RT Description: RVT_N Location: 154978-155221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155263-155344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155263-155344 bp Feature: gene Location: 155667-156092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155700-155889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155700-155889 bp Feature: domain Description: GIIM Note: maturase Location: 155946-156075 bp Feature: domain Description: GIIM Note: maturase Location: 155946-156075 bp Feature: gene Location: 156037-156306 bp Feature: domain Description: GIIM Note: maturase Location: 156073-156175 bp Feature: domain Description: GIIM Note: maturase Location: 156073-156175 bp Feature: gene Location: 156431-156613 bp Feature: domain Description: HNH Note: nucleases Location: 156434-156566 bp Feature: domain Description: HNH Note: nucleases Location: 156434-156566 bp Feature: gene Location: 158031-158246 bp Feature: domain Description: DLP_2 Location: 158097-158235 bp Feature: domain Description: DLP_2 Location: 158097-158235 bp Feature: gene Location: 158313-158819 bp Feature: domain Description: McrA Location: 158373-158706 bp Feature: domain Description: McrA Location: 158373-158706 bp Feature: gene Location: 158959-159243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158968-159097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158968-159097 bp Feature: gene Location: 159351-159758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159354-159747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 159354-159747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DLP_2 (cd09912), McrA (COG4058)

Seq: BLZO01000093.1 Okeania sp. KiyG1 DNA, sequence093, whole genome shotgun sequence (205974 bp)
Overview 1 RT 1: 74937-81859 bp Neighborhood of RT #1 [74937, 81870] Tam RVT_N RVT-GII GIIM HNHc Glyco_tranf_GTA_type PRK00509 Feature: gene Location: 74937-75740 bp Feature: domain Description: Tam Location: 74985-75723 bp Feature: domain Description: Tam Location: 74985-75723 bp Feature: gene Location: 76125-76346 bp Feature: gene Location: 77004-78719 bp Feature: RT Description: RVT_N Location: 77046-77292 bp Feature: RT Description: RVT_N Location: 77046-77292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77334-78006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77334-78006 bp Feature: domain Description: GIIM Note: maturase Location: 78105-78306 bp Feature: domain Description: GIIM Note: maturase Location: 78105-78306 bp Feature: domain Description: HNHc Note: nucleases Location: 78516-78675 bp Feature: domain Description: HNHc Note: nucleases Location: 78516-78675 bp Feature: gene Location: 79269-80186 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 79284-79827 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 79284-79827 bp Feature: gene Location: 80668-81870 bp Feature: domain Description: PRK00509 Location: 80680-81859 bp Feature: domain Description: PRK00509 Location: 80680-81859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tam (COG4106), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Glyco_tranf_GTA_type (cl11394), PRK00509 (argininosuccinate synthase; Provisional)

Seq: BLZO01000109.1 Okeania sp. KiyG1 DNA, sequence109, whole genome shotgun sequence (155819 bp)
Overview 1 RT 1: 24773-32479 bp Neighborhood of RT #1 [24773, 32479] HflB RVT_N RVT-GII YkfC HNHc RVT-GII GIIM McrA RVT_N RVT-GII OrfB_Zn_ribbon Feature: gene Location: 24773-26764 bp Feature: domain Description: HflB Location: 24965-26717 bp Feature: domain Description: HflB Location: 24965-26717 bp Feature: gene Location: 26788-27069 bp Feature: gene Location: 27075-28754 bp Feature: RT Description: RVT_N Location: 27123-27366 bp Feature: RT Description: RVT_N Location: 27123-27366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27417-28056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27417-28056 bp Feature: domain Description: YkfC Location: 28197-28404 bp Feature: domain Description: YkfC Location: 28197-28404 bp Feature: domain Description: HNHc Note: nucleases Location: 28563-28722 bp Feature: domain Description: HNHc Note: nucleases Location: 28563-28722 bp Feature: gene Location: 29408-30589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29411-29786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29411-29786 bp Feature: domain Description: GIIM Note: maturase Location: 29888-30119 bp Feature: domain Description: GIIM Note: maturase Location: 29888-30119 bp Feature: domain Description: McrA Location: 30221-30539 bp Feature: domain Description: McrA Location: 30221-30539 bp Feature: gene Location: 30561-31298 bp Feature: RT Description: RVT_N Location: 30660-30906 bp Feature: RT Description: RVT_N Location: 30660-30906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30948-31260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30948-31260 bp Feature: gene Location: 31782-32060 bp Feature: domain Description: OrfB_Zn_ribbon Location: 31788-31956 bp Feature: domain Description: OrfB_Zn_ribbon Location: 31788-31956 bp Feature: gene Location: 32207-32479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HflB (COG0465), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), GIIM (pfam08388), McrA (COG4058), OrfB_Zn_ribbon (pfam07282)

Seq: BLZO01000116.1 Okeania sp. KiyG1 DNA, sequence116, whole genome shotgun sequence (52209 bp)
Overview 1 RT 1: 43240-46030 bp Neighborhood of RT #1 [43240, 46368] GIIM McrA RVT_N RVT-GII RRXRR HNHc Feature: gene Location: 43240-43533 bp Feature: gene Location: 43546-44142 bp Feature: domain Description: GIIM Note: maturase Location: 43600-43738 bp Feature: domain Description: GIIM Note: maturase Location: 43600-43738 bp Feature: domain Description: McrA Location: 43813-44107 bp Feature: domain Description: McrA Location: 43813-44107 bp Feature: gene Location: 44162-45055 bp Feature: RT Description: RVT_N Location: 44186-44432 bp Feature: RT Description: RVT_N Location: 44186-44432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44480-45023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44480-45023 bp Feature: gene Location: 45374-45580 bp Feature: gene Location: 45664-46368 bp Feature: domain Description: RRXRR Location: 45691-45859 bp Feature: domain Description: RRXRR Location: 45691-45859 bp Feature: domain Description: HNHc Note: nucleases Location: 45880-46030 bp Feature: domain Description: HNHc Note: nucleases Location: 45880-46030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RVT-GII, RRXRR (pfam14239), HNHc (smart00507)

Seq: BLZO01000118.1 Okeania sp. KiyG1 DNA, sequence118, whole genome shotgun sequence (243131 bp)
Overview 1 RT 1: 149651-155224 bp Neighborhood of RT #1 [149651, 155400] YhhI RVT_N RVT-GII RVT-GII GIIM McrA PLN00072 terB_like Feature: gene Location: 149651-150220 bp Feature: domain Description: YhhI Location: 149924-150134 bp Feature: domain Description: YhhI Location: 149924-150134 bp Feature: gene Location: 151819-152223 bp Feature: RT Description: RVT_N Location: 151987-152203 bp Feature: RT Description: RVT_N Location: 151987-152203 bp Feature: gene Location: 152202-152933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152277-152796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152277-152796 bp Feature: gene Location: 152791-153711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152803-152971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152803-152971 bp Feature: domain Description: GIIM Note: maturase Location: 153043-153277 bp Feature: domain Description: GIIM Note: maturase Location: 153043-153277 bp Feature: domain Description: McrA Location: 153358-153649 bp Feature: domain Description: McrA Location: 153358-153649 bp Feature: gene Location: 153848-154315 bp Feature: domain Description: PLN00072 Location: 153851-154304 bp Feature: domain Description: PLN00072 Location: 153851-154304 bp Feature: gene Location: 154918-155400 bp Feature: domain Description: terB_like Location: 154972-155224 bp Feature: domain Description: terB_like Location: 154972-155224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), PLN00072 (3-isopropylmalate isomerase/dehydratase small subunit; Provisional), terB_like (cl11965)

Seq: BLZO01000120.1 Okeania sp. KiyG1 DNA, sequence120, whole genome shotgun sequence (12508 bp)
Overview 1 RT 1: 9970-12326 bp Neighborhood of RT #1 [9970, 12505] Rnd RVT_N RVT-GII GIIM Feature: gene Location: 9970-10440 bp Feature: domain Description: Rnd Location: 9979-10423 bp Feature: domain Description: Rnd Location: 9979-10423 bp Feature: gene Location: 10647-10841 bp Feature: gene Location: 11081-12505 bp Feature: RT Description: RVT_N Location: 11084-11270 bp Feature: RT Description: RVT_N Location: 11084-11270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11312-11990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11312-11990 bp Feature: domain Description: GIIM Note: maturase Location: 12098-12326 bp Feature: domain Description: GIIM Note: maturase Location: 12098-12326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Rnd (COG0349)

Seq: BLZO01000121.1 Okeania sp. KiyG1 DNA, sequence121, whole genome shotgun sequence (158570 bp)
Overview 1 RT 1: 268-5142 bp Neighborhood of RT #1 [268, 5216] RVT_N RVT-GII GIIM Pentapeptide RND_mfp RND_mfp RND_mfp Feature: gene Location: 268-1764 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT_N Location: 328-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 613-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 613-1255 bp Feature: domain Description: GIIM Note: maturase Location: 1315-1540 bp Feature: domain Description: GIIM Note: maturase Location: 1315-1540 bp Feature: gene Location: 2382-2543 bp Feature: domain Description: Pentapeptide Location: 2433-2532 bp Feature: domain Description: Pentapeptide Location: 2433-2532 bp Feature: gene Location: 3477-5216 bp Feature: domain Description: RND_mfp Location: 3771-4137 bp Feature: domain Description: RND_mfp Location: 3771-4137 bp Feature: domain Description: RND_mfp Location: 4221-4467 bp Feature: domain Description: RND_mfp Location: 4221-4467 bp Feature: domain Description: RND_mfp Location: 4551-5142 bp Feature: domain Description: RND_mfp Location: 4551-5142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pentapeptide (pfam00805), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), RND_mfp (TIGR01730)

Seq: BLZO01000124.1 Okeania sp. KiyG1 DNA, sequence124, whole genome shotgun sequence (53261 bp)
Overview 1 RT 1: 16889-21094 bp Neighborhood of RT #1 [16889, 21094] RVT-GII RVT-GII GIIM RVT_N RVT-GII STKc_PknB_like pfam03781 Feature: gene Location: 16889-17281 bp Feature: gene Location: 17351-17491 bp Feature: gene Location: 17496-18239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17514-17655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17514-17655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17661-17826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17661-17826 bp Feature: domain Description: GIIM Note: maturase Location: 17886-18021 bp Feature: domain Description: GIIM Note: maturase Location: 17886-18021 bp Feature: gene Location: 18352-18825 bp Feature: RT Description: RVT_N Location: 18376-18622 bp Feature: RT Description: RVT_N Location: 18376-18622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18670-18814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18670-18814 bp Feature: gene Location: 19414-20631 bp Feature: domain Description: STKc_PknB_like Location: 19444-20230 bp Feature: domain Description: STKc_PknB_like Location: 19444-20 230 bp Feature: domain Description: pfam03781 Location: 20443-20602 bp Feature: domain Description: pfam03781 Location: 20 443-20 602 bp Feature: gene Location: 20954-21094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), STKc_PknB_like (cd14014), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: BLZO01000130.1 Okeania sp. KiyG1 DNA, sequence130, whole genome shotgun sequence (47058 bp)
Overview 1 RT 1: 39372-44428 bp Neighborhood of RT #1 [39372, 44484] YdcF RVT-GII GIIM McrA group_II_RT_mat RVT-GII LPLAT_AGPAT-like Feature: gene Location: 39372-39512 bp Feature: gene Location: 40013-40624 bp Feature: domain Description: YdcF Location: 40106-40559 bp Feature: domain Description: YdcF Location: 40106-40559 bp Feature: gene Location: 41328-42125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41337-41466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41337-41466 bp Feature: domain Description: GIIM Note: maturase Location: 41538-41772 bp Feature: domain Description: GIIM Note: maturase Location: 41538-41772 bp Feature: domain Description: McrA Location: 41856-42117 bp Feature: domain Description: McrA Location: 41856-421 17 bp Feature: gene Location: 42139-43164 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42394-42580 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 42394-42580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42607-43138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42607-43138 bp Feature: gene Location: 43471-43635 bp Feature: gene Location: 43849-44484 bp Feature: domain Description: LPLAT_AGPAT-like Location: 43924-44428 bp Feature: domain Description: LPLAT_AGPAT-like Location: 43924-44428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YdcF (COG1434), RVT-GII, GIIM (pfam08388), McrA (COG4058), group_II_RT_mat (TIGR04416), LPLAT_AGPAT-like (cd07989)

Seq: BLZO01000152.1 Okeania sp. KiyG1 DNA, sequence152, whole genome shotgun sequence (61693 bp)
Overview 1 RT 1: 13734-18968 bp Neighborhood of RT #1 [13734, 18968] RVT_N RVT-GII RVT-GII GIIM McrA DDE_Tnp_1 Feature: gene Location: 13734-14381 bp Feature: gene Location: 14441-14710 bp Feature: gene Location: 15303-16871 bp Feature: RT Description: RVT_N Location: 15327-15573 bp Feature: RT Description: RVT_N Location: 15327-15573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15621-16044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15621-16044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16050-16215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16050-16215 bp Feature: domain Description: GIIM Note: maturase Location: 16272-16395 bp Feature: domain Description: GIIM Note: maturase Location: 16272-16395 bp Feature: domain Description: McrA Location: 16482-16770 bp Feature: domain Description: McrA Location: 16482-16770 bp Feature: gene Location: 17382-18548 bp Feature: domain Description: DDE_Tnp_1 Location: 17715-18363 bp Feature: domain Description: DDE_Tnp_1 Location: 17715-18363 bp Feature: gene Location: 18567-18968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), DDE_Tnp_1 (pfam01609)

Seq: BLZO01000153.1 Okeania sp. KiyG1 DNA, sequence153, whole genome shotgun sequence (76637 bp)
Overview 1 RT 1: 13730-20710 bp Neighborhood of RT #1 [13730, 20710] RVT_N RVT-GII RVT-GII GIIM McrA TraC-F-type TraC-F-type Feature: gene Location: 13730-14377 bp Feature: gene Location: 14451-14705 bp Feature: gene Location: 15298-16866 bp Feature: RT Description: RVT_N Location: 15322-15568 bp Feature: RT Description: RVT_N Location: 15322-15568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15616-16039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15616-16039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16045-16210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16045-16210 bp Feature: domain Description: GIIM Note: maturase Location: 16267-16390 bp Feature: domain Description: GIIM Note: maturase Location: 16267-16390 bp Feature: domain Description: McrA Location: 16477-16765 bp Feature: domain Description: McrA Location: 16477-16765 bp Feature: gene Location: 16940-19807 bp Feature: domain Description: TraC-F-type Location: 18275-18695 bp Feature: domain Description: TraC-F-type Location: 18275-18695 bp Feature: domain Description: TraC-F-type Location: 19268-19700 bp Feature: domain Description: TraC-F-type Location: 19268-19700 bp Feature: gene Location: 19829-20710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), TraC-F-type (TIGR02746)

Seq: BLZO01000154.1 Okeania sp. KiyG1 DNA, sequence154, whole genome shotgun sequence (66634 bp)
Overview 1 RT 1: 13736-17781 bp Neighborhood of RT #1 [13736, 17781] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 13736-14383 bp Feature: gene Location: 14457-14711 bp Feature: gene Location: 15304-16872 bp Feature: RT Description: RVT_N Location: 15328-15574 bp Feature: RT Description: RVT_N Location: 15328-15574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15622-16045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15622-16045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16051-16216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16051-16216 bp Feature: domain Description: GIIM Note: maturase Location: 16273-16396 bp Feature: domain Description: GIIM Note: maturase Location: 16273-16396 bp Feature: domain Description: McrA Location: 16483-16771 bp Feature: domain Description: McrA Location: 16483-16771 bp Feature: gene Location: 17299-17451 bp Feature: gene Location: 17584-17781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: BLZO01000155.1 Okeania sp. KiyG1 DNA, sequence155, whole genome shotgun sequence (25780 bp)
Overview 1 RT 1: 22883-25768 bp Neighborhood of RT #1 [22883, 25779] Peptidase_C14 RVT_N RVT-GII GIIM Feature: gene Location: 22883-23110 bp Feature: gene Location: 23763-24089 bp Feature: domain Description: Peptidase_C14 Location: 23787-24057 bp Feature: domain Description: Peptidase_C14 Location: 23787-24057 bp Feature: gene Location: 24679-25779 bp Feature: RT Description: RVT_N Location: 24703-24949 bp Feature: RT Description: RVT_N Location: 24703-24949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24997-25591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24997-25 591 bp Feature: domain Description: GIIM Note: maturase Location: 25648-25768 bp Feature: domain Description: GIIM Note: maturase Location: 25 648-25 768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: BLZO01000187.1 Okeania sp. KiyG1 DNA, sequence187, whole genome shotgun sequence (228415 bp)
Overview 1 RT 1: 169949-174251 bp 2 RT 2: 201344-204931 bp Neighborhood of RT #1 [169949, 174251] Glyco_tranf_GTA_type nodulat_NodC RVT-GII GIIM HNH Neighborhood of RT #2 [201344, 204931] InsQ RVT-GII GIIM HTH_OrfB_IS605 Feature: gene Location: 169949-170098 bp Feature: gene Location: 171342-172259 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 171360-171891 bp Feature: domain Description: Glyco_tranf_GTA_type Location: 171360-171891 bp Feature: domain Description: nodulat_NodC Location: 171900-172026 bp Feature: domain Description: nodulat_NodC Location: 171900-172026 bp Feature: gene Location: 172860-173375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172863-173181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172863-173181 bp Feature: domain Description: GIIM Note: maturase Location: 173238-173373 bp Feature: domain Description: GIIM Note: maturase Location: 173238-173373 bp Feature: gene Location: 173641-173880 bp Feature: domain Description: HNH Note: nucleases Location: 173716-173851 bp Feature: domain Description: HNH Note: nucleases Location: 173716-173851 bp Feature: gene Location: 173886-174251 bp Feature: gene Location: 201344-201661 bp Feature: gene Location: 202120-202386 bp Feature: domain Description: InsQ Location: 202129-202357 bp Feature: domain Description: InsQ Location: 202129-202357 bp Feature: gene Location: 203157-203759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203166-203256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203166-203256 bp Feature: domain Description: GIIM Note: maturase Location: 203355-203580 bp Feature: domain Description: GIIM Note: maturase Location: 203355-203580 bp Feature: gene Location: 203965-204258 bp Feature: domain Description: HTH_OrfB_IS605 Location: 203968-204103 bp Feature: domain Description: HTH_OrfB_IS605 Location: 203968-204103 bp Feature: gene Location: 204389-204931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_tranf_GTA_type (cl11394), nodulat_NodC (TIGR04242), RVT-GII, GIIM (pfam08388), HNH (pfam01844), InsQ (COG0675), HTH_OrfB_IS605 (pfam12323)