myRT

myRT report for GCA_014132475.1_ASM1413247v1

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Seq: BLZV01000005.1 Escherichia coli GFCS1_L DNA, GFCS1L.00005, whole genome shotgun sequence (260296 bp)
Overview 1 RT 1: 63441-69334 bp Neighborhood of RT #1 [63441, 69471] nitrilase RVT-UG5 AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 63441-63911 bp Feature: gene Location: 64258-65490 bp Feature: domain Description: nitrilase Location: 64804-65401 bp Feature: domain Description: nitrilase Location: 64804-65401 bp Feature: gene Location: 65496-67466 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66024-66513 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 66024-6651 3 bp Feature: gene Location: 67761-68564 bp Feature: domain Description: AbiEi_3_N Location: 67794-68055 bp Feature: domain Description: AbiEi_3_N Location: 67794-68055 bp Feature: domain Description: AbiEi_3 Location: 68067-68523 bp Feature: domain Description: AbiEi_3 Location: 68067-68523 bp Feature: gene Location: 68551-69471 bp Feature: domain Description: AbiEii Location: 68593-69334 bp Feature: domain Description: AbiEii Location: 68593-69334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nitrilase (cl11424), RVT-UG5, AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: BLZV01000024.1 Escherichia coli GFCS1_L DNA, GFCS1L.00024, whole genome shotgun sequence (89731 bp)
Overview 1 RT 1: 15828-19368 bp Neighborhood of RT #1 [15828, 19370] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM DDE_Tnp_IS66_C Dps Feature: gene Location: 15828-16889 bp Feature: domain Description: COG4584 Location: 15834-16227 bp Feature: domain Description: COG4584 Location: 15834-162 2 7 bp Feature: domain Description: COG4584 Location: 16341-16755 bp Feature: domain Description: COG4584 Location: 16341-16755 bp Feature: gene Location: 16906-17661 bp Feature: domain Description: IstB_IS21_ATP Location: 16978-17062 bp Feature: domain Description: IstB_IS2 1_ATP Location: 16978-17062 bp Feature: domain Description: IstB_IS21 Location: 17071-17596 bp Feature: domain Description: IstB_IS2 1 Location: 17071-17596 bp Feature: gene Location: 17803-18852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17821-18475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1782 1-18475 bp Feature: domain Description: GIIM Note: maturase Location: 18553-18778 bp Feature: domain Description: GIIM Note: maturase Location: 18553-18778 bp Feature: gene Location: 18968-19114 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18980-19091 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18980-19091 bp Feature: gene Location: 19206-19370 bp Feature: domain Description: Dps Location: 19209-19368 bp Feature: domain Description: Dps Location: 192 09-19368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), Dps (COG0783)

Seq: BLZV01000033.1 Escherichia coli GFCS1_L DNA, GFCS1L.00033, whole genome shotgun sequence (47053 bp)
Overview 1 RT 1: 19332-22397 bp Neighborhood of RT #1 [19332, 22397] RVT-GII GIIM RVT-GII Feature: gene Location: 19332-19502 bp Feature: gene Location: 19640-19819 bp Feature: gene Location: 19918-20439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19924-20206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19924-20206 bp Feature: domain Description: GIIM Note: maturase Location: 20254-20434 bp Feature: domain Description: GIIM Note: maturase Location: 20254-2043 4 bp Feature: gene Location: 20467-21006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20797-20875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20797-20875 bp Feature: gene Location: 21037-21234 bp Feature: gene Location: 21492-22397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLZV01000058.1 Escherichia coli GFCS1_L DNA, GFCS1L.00058, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 259-1537 bp Neighborhood of RT #1 [259, 1782] RVT-GII GIIM Feature: gene Location: 259-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)