myRT

myRT report for GCA_014132515.1_ASM1413251v1

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Seq: BLZX01000003.1 Escherichia coli GFCS1_I DNA, GFCS1I.00003, whole genome shotgun sequence (249604 bp)
Overview 1 RT 1: 190897-196927 bp Neighborhood of RT #1 [190897, 196927] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 190897-191817 bp Feature: domain Description: AbiEii Location: 190939-191680 bp Feature: domain Description: AbiEii Location: 1 90939-1 91 680 bp Feature: gene Location: 191804-192607 bp Feature: domain Description: AbiEi_3_N Location: 191837-192098 bp Feature: domain Description: AbiEi_3_N Location: 1 91 837-1 92098 bp Feature: domain Description: AbiEi_3 Location: 192110-192566 bp Feature: domain Description: AbiEi_3 Location: 1 921 1 0-1 92566 bp Feature: gene Location: 192902-196111 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 193430-193919 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 93430-1 9391 9 bp Feature: domain Description: nitrilase Location: 195425-196022 bp Feature: domain Description: nitrilase Location: 1 95425-1 96022 bp Feature: gene Location: 196272-196412 bp Feature: domain Description: Phage_ASH Location: 196299-196392 bp Feature: domain Description: Phage_ASH Location: 1 96299-1 96392 bp Feature: gene Location: 196694-196927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BLZX01000026.1 Escherichia coli GFCS1_I DNA, GFCS1I.00026, whole genome shotgun sequence (65217 bp)
Overview 1 RT 1: 24420-27475 bp Neighborhood of RT #1 [24420, 27475] RVT-GII RVT-GII GIIM Feature: gene Location: 24420-25325 bp Feature: gene Location: 25583-25780 bp Feature: gene Location: 25811-26350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26141-26219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6141-2 62 19 bp Feature: gene Location: 26378-26899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26384-26666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6384-2 6666 bp Feature: domain Description: GIIM Note: maturase Location: 26714-26894 bp Feature: domain Description: GIIM Note: maturase Location: 2 6714-2 6894 bp Feature: gene Location: 26998-27177 bp Feature: gene Location: 27287-27475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLZX01000029.1 Escherichia coli GFCS1_I DNA, GFCS1I.00029, whole genome shotgun sequence (63250 bp)
Overview 1 RT 1: 43881-47289 bp Neighborhood of RT #1 [43881, 47423] Dps RVT-GII GIIM IstB_IS21_ATP IstB_IS21 COG4584 COG4584 Feature: gene Location: 43881-44045 bp Feature: domain Description: Dps Location: 43884-44043 bp Feature: domain Description: Dps Location: 43 884-44043 bp Feature: gene Location: 44206-44373 bp Feature: gene Location: 44399-45448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44417-45071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44417-45071 bp Feature: domain Description: GIIM Note: maturase Location: 45149-45374 bp Feature: domain Description: GIIM Note: maturase Location: 45149-453 74 bp Feature: gene Location: 45590-46345 bp Feature: domain Description: IstB_IS21_ATP Location: 45662-45746 bp Feature: domain Description: IstB_IS21_ATP Location: 45662-45746 bp Feature: domain Description: IstB_IS21 Location: 45755-46280 bp Feature: domain Description: IstB_IS21 Location: 45755-46280 bp Feature: gene Location: 46362-47423 bp Feature: domain Description: COG4584 Location: 46368-46761 bp Feature: domain Description: COG4584 Location: 463 68-46761 bp Feature: domain Description: COG4584 Location: 46875-47289 bp Feature: domain Description: COG4584 Location: 46875-47289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dps (COG0783), RVT-GII, GIIM (pfam08388), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase )

Seq: BLZX01000082.1 Escherichia coli GFCS1_I DNA, GFCS1I.00082, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 259-1537 bp Neighborhood of RT #1 [259, 1782] RVT-GII GIIM Feature: gene Location: 259-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)