myRT

myRT report for GCA_014132555.1_ASM1413255v1

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Seq: BLZZ01000001.1 Escherichia coli GFCS1_H DNA, GFCS1H.00001, whole genome shotgun sequence (397310 bp)
Overview 1 RT 1: 369827-372892 bp Neighborhood of RT #1 [369827, 372892] RVT-GII GIIM RVT-GII Feature: gene Location: 369827-369997 bp Feature: gene Location: 370135-370314 bp Feature: gene Location: 370413-370934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370419-370701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37041 9-370701 bp Feature: domain Description: GIIM Note: maturase Location: 370749-370929 bp Feature: domain Description: GIIM Note: maturase Location: 370749-370929 bp Feature: gene Location: 370962-371501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371292-371370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371 292-371 370 bp Feature: gene Location: 371532-371729 bp Feature: gene Location: 371987-372892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLZZ01000012.1 Escherichia coli GFCS1_H DNA, GFCS1H.00012, whole genome shotgun sequence (131511 bp)
Overview 1 RT 1: 102777-108808 bp Neighborhood of RT #1 [102777, 108808] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 102777-103697 bp Feature: domain Description: AbiEii Location: 102819-103560 bp Feature: domain Description: AbiEii Location: 102 819-103560 bp Feature: gene Location: 103684-104487 bp Feature: domain Description: AbiEi_3_N Location: 103717-103978 bp Feature: domain Description: AbiEi_3_N Location: 103717-103978 bp Feature: domain Description: AbiEi_3 Location: 103990-104446 bp Feature: domain Description: AbiEi_3 Location: 103990-104446 bp Feature: gene Location: 104782-107991 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105310-105799 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 105310-105799 bp Feature: domain Description: nitrilase Location: 107305-107902 bp Feature: domain Description: nitrilase Location: 107305-107902 bp Feature: gene Location: 108152-108292 bp Feature: domain Description: Phage_ASH Location: 108179-108272 bp Feature: domain Description: Phage_ASH Location: 108179-1082 72 bp Feature: gene Location: 108338-108808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: BLZZ01000022.1 Escherichia coli GFCS1_H DNA, GFCS1H.00022, whole genome shotgun sequence (89333 bp)
Overview 1 RT 1: 15430-18970 bp Neighborhood of RT #1 [15430, 18972] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM DDE_Tnp_IS66_C Dps Feature: gene Location: 15430-16491 bp Feature: domain Description: COG4584 Location: 15436-15829 bp Feature: domain Description: COG4584 Location: 1543 6-15829 bp Feature: domain Description: COG4584 Location: 15943-16357 bp Feature: domain Description: COG4584 Location: 15943 -163 57 bp Feature: gene Location: 16508-17263 bp Feature: domain Description: IstB_IS21_ATP Location: 16580-16664 bp Feature: domain Description: IstB_IS21_ATP Location: 16580-16664 bp Feature: domain Description: IstB_IS21 Location: 16673-17198 bp Feature: domain Description: IstB_IS21 Location: 16673 -17198 bp Feature: gene Location: 17405-18454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17423-18077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17423 -18077 bp Feature: domain Description: GIIM Note: maturase Location: 18155-18380 bp Feature: domain Description: GIIM Note: maturase Location: 18155-183 80 bp Feature: gene Location: 18570-18716 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18582-18693 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 18582-18693 bp Feature: gene Location: 18808-18972 bp Feature: domain Description: Dps Location: 18811-18970 bp Feature: domain Description: Dps Location: 18811-18970 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), Dps (COG0783)

Seq: BLZZ01000059.1 Escherichia coli GFCS1_H DNA, GFCS1H.00059, whole genome shotgun sequence (1874 bp)
Overview 1 RT 1: 259-1537 bp Neighborhood of RT #1 [259, 1782] RVT-GII GIIM Feature: gene Location: 259-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 532-1264 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Feature: domain Description: GIIM Note: maturase Location: 1339-1537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)