myRT

myRT report for GCA_014137795.1_ASM1413779v1

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Seq: JACGYY010000001.1 Clostridium beijerinckii strain DJ028 Ga0423196_01, whole genome shotgun sequence (4011870 bp)
Overview 1 RT 1: 1626767-1632306 bp Neighborhood of RT #1 [1626767, 1632350] Recombinase Zn_ribbon_recom RVT-GII GIIM WrbA PucR Feature: gene Location: 1626767-1627456 bp Feature: domain Description: Recombinase Location: 1626908-1627226 bp Feature: domain Description: Recombinase Location: 1 626908-1 627226 bp Feature: domain Description: Zn_ribbon_recom Location: 1627274-1627388 bp Feature: domain Description: Zn_ribbon_recom Location: 1 627274-1 627388 bp Feature: gene Location: 1627651-1627911 bp Feature: gene Location: 1628306-1629721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1628663-1629281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 628663-1 629281 bp Feature: domain Description: GIIM Note: maturase Location: 1629332-1629560 bp Feature: domain Description: GIIM Note: maturase Location: 1 629332-1 629560 bp Feature: gene Location: 1630174-1630752 bp Feature: domain Description: WrbA Location: 1630192-1630552 bp Feature: domain Description: WrbA Location: 1 6301 92-1 630552 bp Feature: gene Location: 1630776-1632350 bp Feature: domain Description: PucR Location: 1631883-1632306 bp Feature: domain Description: PucR Location: 1 631 883-1 632306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RVT-GII, GIIM (pfam08388), WrbA (COG0655), PucR (pfam07905)

Seq: JACGYY010000003.1 Clostridium beijerinckii strain DJ028 Ga0423196_03, whole genome shotgun sequence (454368 bp)
Overview 1 RT 1: 340925-348716 bp Neighborhood of RT #1 [340925, 348730] sensory_box PAS_9 sensory_box SpoIIE DUF1848 RVT-UG25 DUF1848 Feature: gene Location: 340925-342748 bp Feature: domain Description: sensory_box Location: 340988-341357 bp Feature: domain Description: sensory_box Location: 340988-341357 bp Feature: domain Description: PAS_9 Location: 341390-341678 bp Feature: domain Description: PAS_9 Location: 341390-341678 bp Feature: domain Description: sensory_box Location: 341711-342059 bp Feature: domain Description: sensory_box Location: 341711-342 059 bp Feature: domain Description: SpoIIE Location: 342218-342743 bp Feature: domain Description: SpoIIE Location: 342 2 18-342 743 bp Feature: gene Location: 343538-344056 bp Feature: domain Description: DUF1848 Location: 343643-344027 bp Feature: domain Description: DUF1848 Location: 343643-34402 7 bp Feature: gene Location: 344241-347072 bp Feature: RT Description: RVT-UG25 Note: UG25 RT Location: 345546-345957 bp Feature: RT Description: RVT-UG2 5 Note: UG2 5 RT Location: 345546-345957 bp Feature: gene Location: 347186-347548 bp Feature: gene Location: 347849-348730 bp Feature: domain Description: DUF1848 Location: 347906-348716 bp Feature: domain Description: DUF1848 Location: 347906-348716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT sensory_box (TIGR00229), PAS_9 (pfam13426), SpoIIE (pfam07228), DUF1848 (pfam08902), RVT-UG25