myRT

myRT report for GCA_014138095.1_ASM1413809v1

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Seq: JACGXE010000011.1 Ochrobactrum sp. RH2CCR150 Ga0326521_11, whole genome shotgun sequence (133638 bp)
Overview 1 RT 1: 8277-13025 bp Neighborhood of RT #1 [8277, 13171] SR_ResInv Recombinase RVT-GII ZapB DDE_Tnp_IS66 DDE_Tnp_IS66 Feature: gene Location: 8277-9233 bp Feature: domain Description: SR_ResInv Location: 8367-8736 bp Feature: domain Description: SR_ResInv Location: 8367-8736 bp Feature: domain Description: Recombinase Location: 9096-9225 bp Feature: domain Description: Recombinase Location: 9096-9225 bp Feature: gene Location: 9509-9838 bp Feature: gene Location: 9842-11320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10253-10943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0253-1 0943 bp Feature: gene Location: 11502-11843 bp Feature: domain Description: ZapB Location: 11571-11703 bp Feature: domain Description: ZapB Location: 1 1 571 -1 1 703 bp Feature: gene Location: 11768-13171 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12035-12398 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2035-1 2398 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12620-13025 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2620-1 3025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), Recombinase (pfam07508), RVT-GII, ZapB (pfam06005), DDE_Tnp_IS66 (pfam03050)

Seq: JACGXE010000017.1 Ochrobactrum sp. RH2CCR150 Ga0326521_17, whole genome shotgun sequence (95012 bp)
Overview 1 RT 1: 85430-90896 bp Neighborhood of RT #1 [85430, 91102] MvaI_BcnI RVT-UG16 DUF87 Feature: gene Location: 85430-86749 bp Feature: domain Description: MvaI_BcnI Location: 85967-86723 bp Feature: domain Description: MvaI_BcnI Location: 85967-8672 3 bp Feature: gene Location: 87050-87247 bp Feature: gene Location: 87543-88721 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 87954-88326 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 87954-8832 6 bp Feature: gene Location: 88676-89050 bp Feature: gene Location: 89069-91102 bp Feature: domain Description: DUF87 Location: 90287-90896 bp Feature: domain Description: DUF87 Location: 902 87-90896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MvaI_BcnI (pfam15515), RVT-UG16, DUF87 (pfam01935)