myRT

myRT report for GCA_014138705.1_ASM1413870v1

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Seq: JACJIC010000003.1 Rhodococcus percolatus strain DSM 44240 Ga0436915_03, whole genome shotgun sequence (1109510 bp)
Overview 1 RT 1: 1040841-1049393 bp Neighborhood of RT #1 [1040841, 1049393] Pyridox_ox_2 Tra8 RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII HTH_23 Tra8 Feature: gene Location: 1040841-1041305 bp Feature: domain Description: Pyridox_ox_2 Location: 1040883-1041237 bp Feature: domain Description: Pyridox_ox_2 Location: 1 040883-1 041 237 bp Feature: gene Location: 1041970-1042224 bp Feature: domain Description: Tra8 Location: 1041976-1042216 bp Feature: domain Description: Tra8 Location: 1 041 976-1 04221 6 bp Feature: gene Location: 1042523-1043257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042526-1042808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 042526-1 042808 bp Feature: domain Description: GIIM Note: maturase Location: 1042886-1043102 bp Feature: domain Description: GIIM Note: maturase Location: 1 042886-1 0431 02 bp Feature: gene Location: 1043424-1044653 bp Feature: domain Description: Phage_int_SAM_1 Location: 1043766-1043994 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 043766-1 043994 bp Feature: domain Description: INT_RitA_C_like Location: 1044081-1044618 bp Feature: domain Description: INT_RitA_C_like Location: 1 044081 -1 04461 8 bp Feature: gene Location: 1044650-1045630 bp Feature: domain Description: INT_RitB_C_like Location: 1044983-1045562 bp Feature: domain Description: INT_RitB_C_like Location: 1 044983-1 045562 bp Feature: gene Location: 1045620-1046624 bp Feature: domain Description: Phage_int_SAM_1 Location: 1045665-1045914 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 045665-1 04591 4 bp Feature: domain Description: INT_RitC_C_like Location: 1045995-1046544 bp Feature: domain Description: INT_RitC_C_like Location: 1 045995-1 046544 bp Feature: gene Location: 1046647-1047519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1047028-1047418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 047028-1 04741 8 bp Feature: gene Location: 1047998-1048804 bp Feature: domain Description: HTH_23 Location: 1048067-1048136 bp Feature: domain Description: HTH_23 Location: 1 048067-1 0481 36 bp Feature: domain Description: Tra8 Location: 1048184-1048742 bp Feature: domain Description: Tra8 Location: 1 0481 84-1 048742 bp Feature: gene Location: 1048977-1049393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pyridox_ox_2 (pfam12900), Tra8 (COG2826), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), HTH_23 (pfam13384)