myRT

myRT report for GCA_014138725.1_ASM1413872v1

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Seq: JACJID010000001.1 Kutzneria viridogrisea strain DSM 43850 Ga0436927_01, whole genome shotgun sequence (2230384 bp)
Overview 1 RT 1: 1230867-1235976 bp Neighborhood of RT #1 [1230867, 1236062] SnoaL_4 DUF222 RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 1230867-1231319 bp Feature: domain Description: SnoaL_4 Location: 1230918-1231284 bp Feature: domain Description: SnoaL_4 Location: 1 23091 8-1 231 284 bp Feature: gene Location: 1232060-1232554 bp Feature: domain Description: DUF222 Location: 1232069-1232414 bp Feature: domain Description: DUF222 Location: 1 232069-1 23241 4 bp Feature: gene Location: 1233447-1233941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1233450-1233933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 233450-1 233933 bp Feature: gene Location: 1234159-1235328 bp Feature: domain Description: Phage_int_SAM_1 Location: 1234447-1234687 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 234447-1 234687 bp Feature: domain Description: INT_RitA_C_like Location: 1234771-1235287 bp Feature: domain Description: INT_RitA_C_like Location: 1 234771 -1 235287 bp Feature: gene Location: 1235325-1236062 bp Feature: domain Description: INT_RitB_C_like Location: 1235646-1235976 bp Feature: domain Description: INT_RitB_C_like Location: 1 235646-1 235976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SnoaL_4 (pfam13577), DUF222 (pfam02720), RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: JACJID010000009.1 Kutzneria viridogrisea strain DSM 43850 Ga0436927_09, whole genome shotgun sequence (446537 bp)
Overview 1 RT 1: 43065-46194 bp Neighborhood of RT #1 [43065, 46244] YjbI Usp RVT-Retrons SgaA_N_like SRPBCC Feature: gene Location: 43065-43664 bp Feature: domain Description: YjbI Location: 43086-43617 bp Feature: domain Description: YjbI Location: 43086-43617 bp Feature: gene Location: 43661-44119 bp Feature: domain Description: Usp Location: 43718-44117 bp Feature: domain Description: Usp Location: 43718-44117 bp Feature: gene Location: 44133-45359 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44535-45132 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44535-45132 bp Feature: gene Location: 45358-45729 bp Feature: domain Description: SgaA_N_like Location: 45373-45709 bp Feature: domain Description: SgaA_N_like Location: 45373-45709 bp Feature: gene Location: 45726-46244 bp Feature: domain Description: SRPBCC Location: 45765-46194 bp Feature: domain Description: SRPBCC Location: 45765-46194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), Usp (pfam00582), RVT-Retrons, SgaA_N_like (cd07247), SRPBCC (COG4276)