myRT

myRT report for GCA_014145435.1_ASM1414543v1

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Seq: JACIVA010000037.1 Limosilactobacillus sp. STM2_1 scaffold37, whole genome shotgun sequence (99304 bp)
Overview 1 RT 1: 1-3752 bp Neighborhood of RT #1 [1, 3799] RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 1-1347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 9-937 bp Feature: domain Description: GIIM Note: maturase Location: 991-1219 bp Feature: domain Description: GIIM Note: maturase Location: 991 -1 21 9 bp Feature: gene Location: 1835-3376 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1910-2147 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 91 0-21 47 bp Feature: domain Description: zf-IS66 Location: 2180-2306 bp Feature: domain Description: zf-IS66 Location: 21 80-2306 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2366-3215 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2366-321 5 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3233-3344 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3233-3344 bp Feature: gene Location: 3443-3799 bp Feature: domain Description: TnpB_IS66 Location: 3476-3752 bp Feature: domain Description: TnpB_IS66 Location: 3476-3752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: JACIVA010000047.1 Limosilactobacillus sp. STM2_1 scaffold47, whole genome shotgun sequence (37157 bp)
Overview 1 RT 1: 33801-36750 bp Neighborhood of RT #1 [33801, 36914] DDE_Tnp_ISL3 RVT-GII GIIM Feature: gene Location: 33801-34823 bp Feature: gene Location: 34960-35463 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 35077-35404 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 35077-35404 bp Feature: gene Location: 35532-36914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35850-36468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35850-36468 bp Feature: domain Description: GIIM Note: maturase Location: 36522-36750 bp Feature: domain Description: GIIM Note: maturase Location: 3652 2 -36750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388)