myRT

myRT report for GCA_014145455.1_ASM1414545v1

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Seq: JACIVB010000041.1 Limosilactobacillus sp. STM3_1 scaffold41, whole genome shotgun sequence (37157 bp)
Overview 1 RT 1: 244-3357 bp Neighborhood of RT #1 [244, 3357] RVT-GII GIIM DDE_Tnp_ISL3 Feature: gene Location: 244-1626 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1 1 80 bp Feature: domain Description: GIIM Note: maturase Location: 1234-1462 bp Feature: domain Description: GIIM Note: maturase Location: 1 234-1 462 bp Feature: gene Location: 1695-2198 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1812-2139 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 81 2-21 39 bp Feature: gene Location: 2335-3357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISL3 (pfam01610), RVT-GII, GIIM (pfam08388)

Seq: JACIVB010000062.1 Limosilactobacillus sp. STM3_1 scaffold62, whole genome shotgun sequence (259248 bp)
Overview 1 RT 1: 255450-259120 bp Neighborhood of RT #1 [255450, 259245] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM Feature: gene Location: 255450-255806 bp Feature: domain Description: TnpB_IS66 Location: 255483-255759 bp Feature: domain Description: TnpB_IS66 Location: 2 55483-2 55759 bp Feature: gene Location: 255873-257414 bp Feature: domain Description: LZ_Tnp_IS66 Location: 255948-256185 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2 55948-2 56185 bp Feature: domain Description: zf-IS66 Location: 256218-256344 bp Feature: domain Description: zf-IS66 Location: 2 562 18-2 56344 bp Feature: domain Description: DDE_Tnp_IS66 Location: 256404-257253 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 56404-2 572 53 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 257271-257382 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 572 71-2 57382 bp Feature: gene Location: 257902-259245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258220-258838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 582 2 0-2 58838 bp Feature: domain Description: GIIM Note: maturase Location: 258892-259120 bp Feature: domain Description: GIIM Note: maturase Location: 2 58892 -2 5912 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388)