myRT

myRT report for GCA_014156395.1_ASM1415639v1

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Seq: RQWO01000222.1 Klebsiella pneumoniae strain CRKP9 NODE_237_length_405_cov_0.471223, whole genome shotgun sequence (405 bp)
Overview 1 RT 1: 3-402 bp Neighborhood of RT #1 [3, 404] RVT-GII GIIM Feature: gene Location: 3-404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-1 71 bp Feature: domain Description: GIIM Note: maturase Location: 231-402 bp Feature: domain Description: GIIM Note: maturase Location: 231 -402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RQWO01000037.1 Klebsiella pneumoniae strain CRKP9 NODE_37_length_54829_cov_42.2537, whole genome shotgun sequence (54829 bp)
Overview 1 RT 1: 43790-47393 bp Neighborhood of RT #1 [43790, 47518] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 43790-44047 bp Feature: gene Location: 44078-44353 bp Feature: gene Location: 44927-46594 bp Feature: RT Description: RVT_N Location: 44975-45212 bp Feature: RT Description: RVT_N Location: 44975-452 12 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45263-45905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 63-45905 bp Feature: domain Description: GIIM Note: maturase Location: 45956-46190 bp Feature: domain Description: GIIM Note: maturase Location: 45956-46190 bp Feature: domain Description: HNHc Note: nucleases Location: 46400-46559 bp Feature: domain Description: HNHc Note: nucleases Location: 46400-46559 bp Feature: gene Location: 46908-47099 bp Feature: gene Location: 47096-47518 bp Feature: domain Description: DUF1380 Location: 47099-47393 bp Feature: domain Description: DUF1380 Location: 47099-47393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: RQWO01000048.1 Klebsiella pneumoniae strain CRKP9 NODE_48_length_24903_cov_22.9226, whole genome shotgun sequence (24903 bp)
Overview 1 RT 1: 17508-23845 bp Neighborhood of RT #1 [17508, 23845] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: gene Location: 18681-18917 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19353-19881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 53 -19881 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: gene Location: 23540-23845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: RQWO01000081.1 Klebsiella pneumoniae strain CRKP9 NODE_81_length_1892_cov_225.795, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII