myRT

myRT report for GCA_014156475.1_ASM1415647v1

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Seq: RQWS01000187.1 Klebsiella pneumoniae strain CRKP5 NODE_196_length_487_cov_0.0388889, whole genome shotgun sequence (487 bp)
Overview 1 RT 1: 2-485 bp Neighborhood of RT #1 [2, 484] RVT-UNC RT_RNaseH_2 Feature: gene Location: 2-484 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5-113 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 5-1 1 3 bp Feature: domain Description: RT_RNaseH_2 Location: 347-485 bp Feature: domain Description: RT_RNaseH_2 Location: 347-485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG25/RVT-UG26/RVT-UG28b(RVT-UNC), RT_RNaseH_2 (pfam17919)

Seq: RQWS01000036.1 Klebsiella pneumoniae strain CRKP5 NODE_36_length_54820_cov_34.5094, whole genome shotgun sequence (54820 bp)
Overview 1 RT 1: 43781-47384 bp Neighborhood of RT #1 [43781, 47509] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 43781-44038 bp Feature: gene Location: 44069-44344 bp Feature: gene Location: 44918-46585 bp Feature: domain Description: RVT_N Location: 44966-45203 bp Feature: domain Description: RVT_N Location: 44966-452 03 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45254-45896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 54-45896 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: HNHc Note: nucleases Location: 46391-46550 bp Feature: domain Description: HNHc Note: nucleases Location: 46391-46550 bp Feature: gene Location: 46899-47090 bp Feature: gene Location: 47087-47509 bp Feature: domain Description: DUF1380 Location: 47090-47384 bp Feature: domain Description: DUF1380 Location: 47090-47384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: RQWS01000046.1 Klebsiella pneumoniae strain CRKP5 NODE_46_length_24904_cov_24.965, whole genome shotgun sequence (24904 bp)
Overview 1 RT 1: 17508-23845 bp Neighborhood of RT #1 [17508, 23845] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: gene Location: 18681-18917 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19350-19884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 50-19884 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: gene Location: 23540-23845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: RQWS01000468.1 Klebsiella pneumoniae strain CRKP5 NODE_511_length_350_cov_0.179372, whole genome shotgun sequence (350 bp)
Overview 1 RT 1: 2-350 bp Neighborhood of RT #1 [2, 349] RVT-UNC Feature: gene Location: 2-349 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 95-350 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 95-350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-CRISPR/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: RQWS01000075.1 Klebsiella pneumoniae strain CRKP5 NODE_75_length_1892_cov_200.303, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75 2-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RQWS01000692.1 Klebsiella pneumoniae strain CRKP5 NODE_761_length_279_cov_0.302632, whole genome shotgun sequence (279 bp)
Overview 1 RT 1: 3-276 bp Neighborhood of RT #1 [3, 278] RVT-GII Feature: gene Location: 3-278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 -276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII