myRT

myRT report for GCA_014156485.1_ASM1415648v1

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Seq: RQWQ01000113.1 Klebsiella pneumoniae strain CRKP7 NODE_120_length_480_cov_0.11898, whole genome shotgun sequence (480 bp)
Overview 1 RT 1: 1-478 bp Neighborhood of RT #1 [1, 477] RVT-UG17 RT_RNaseH_2 Feature: gene Location: 1-477 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 31-205 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 31 -205 bp Feature: domain Description: RT_RNaseH_2 Location: 400-478 bp Feature: domain Description: RT_RNaseH_2 Location: 400-478 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, RT_RNaseH_2 (pfam17919)

Seq: RQWQ01000288.1 Klebsiella pneumoniae strain CRKP7 NODE_312_length_357_cov_0.026087, whole genome shotgun sequence (357 bp)
Overview 1 RT 1: 3-291 bp Neighborhood of RT #1 [3, 356] RVT-UNC Feature: gene Location: 3-356 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 78-291 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 78-2 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG26/RVT-UG20/RVT-UG19(RVT-UNC)

Seq: RQWQ01000034.1 Klebsiella pneumoniae strain CRKP7 NODE_34_length_54820_cov_43.0778, whole genome shotgun sequence (54820 bp)
Overview 1 RT 1: 43781-47384 bp Neighborhood of RT #1 [43781, 47509] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 43781-44038 bp Feature: gene Location: 44069-44344 bp Feature: gene Location: 44918-46585 bp Feature: domain Description: RVT_N Location: 44966-45203 bp Feature: domain Description: RVT_N Location: 44966-45203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45254-45896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45254-45896 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: HNHc Note: nucleases Location: 46391-46550 bp Feature: domain Description: HNHc Note: nucleases Location: 463 91-46550 bp Feature: gene Location: 46899-47090 bp Feature: gene Location: 47087-47509 bp Feature: domain Description: DUF1380 Location: 47090-47384 bp Feature: domain Description: DUF13 80 Location: 47090-473 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: RQWQ01000042.1 Klebsiella pneumoniae strain CRKP7 NODE_42_length_24903_cov_23.5578, whole genome shotgun sequence (24903 bp)
Overview 1 RT 1: 17508-23845 bp Neighborhood of RT #1 [17508, 23845] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 1764 0-18081 bp Feature: gene Location: 18681-18917 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19350-19884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19350-19884 bp Feature: gene Location: 20385-22661 bp Feature: domain Description: AAA_15 Location: 20418-21426 bp Feature: domain Description: AAA_15 Location: 204 18-214 26 bp Feature: gene Location: 23540-23845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: RQWQ01000068.1 Klebsiella pneumoniae strain CRKP7 NODE_68_length_1892_cov_205.635, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75 2-1442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII