myRT

myRT report for GCA_014156555.1_ASM1415655v1

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Seq: RQWU01000096.1 Klebsiella pneumoniae strain CRKP3 NODE_100_length_553_cov_0.107981, whole genome shotgun sequence (288 bp)
Overview 1 RT 1: 2-239 bp Neighborhood of RT #1 [2, 262] RVT-UNC Feature: gene Location: 2-262 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 44-239 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 44-239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons/RVT-UG28/RVT-UG11(RVT-UNC)

Seq: RQWU01000034.1 Klebsiella pneumoniae strain CRKP3 NODE_34_length_54820_cov_48.3564, whole genome shotgun sequence (54820 bp)
Overview 1 RT 1: 43781-47384 bp Neighborhood of RT #1 [43781, 47509] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 43781-44038 bp Feature: gene Location: 44069-44344 bp Feature: gene Location: 44918-46585 bp Feature: domain Description: RVT_N Location: 44966-45203 bp Feature: domain Description: RVT_N Location: 44966-452 03 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45254-45896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 452 54-45896 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: GIIM Note: maturase Location: 45947-46181 bp Feature: domain Description: HNHc Note: nucleases Location: 46391-46550 bp Feature: domain Description: HNHc Note: nucleases Location: 46391-46550 bp Feature: gene Location: 46899-47090 bp Feature: gene Location: 47087-47509 bp Feature: domain Description: DUF1380 Location: 47090-47384 bp Feature: domain Description: DUF1380 Location: 47090-47384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128)

Seq: RQWU01000035.1 Klebsiella pneumoniae strain CRKP3 NODE_35_length_41971_cov_24.2349, whole genome shotgun sequence (41971 bp)
Overview 1 RT 1: 17508-23845 bp Neighborhood of RT #1 [17508, 23845] STKc_PknB_like RVT-Retrons AAA_15 Feature: gene Location: 17508-18611 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: domain Description: STKc_PknB_like Location: 17640-18081 bp Feature: gene Location: 18681-18917 bp Feature: gene Location: 19170-20270 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19350-19884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 50-19884 bp Feature: gene Location: 20385-22631 bp Feature: domain Description: AAA_15 Location: 20388-21396 bp Feature: domain Description: AAA_15 Location: 203 88-213 96 bp Feature: gene Location: 23540-23845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175)

Seq: RQWU01000069.1 Klebsiella pneumoniae strain CRKP3 NODE_69_length_1892_cov_210.875, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 347-1442 bp Neighborhood of RT #1 [347, 1834] RVT-GII Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-14 4 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII