myRT

myRT report for GCA_014163635.1_ASM1416363v1

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Seq: JACJDS010000010.1 Pseudoalteromonas sp. SR44-8 NODE_10_length_142677_cov_8.7, whole genome shotgun sequence (142677 bp)
Overview 1 RT 1: 136864-141687 bp Neighborhood of RT #1 [136864, 142271] Peptidase_S66_mccF_like Arm-DNA-bind_3 INT_P4_C RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 136864-137916 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 136912-137854 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 1 3691 2-1 37854 bp Feature: gene Location: 138206-139462 bp Feature: domain Description: Arm-DNA-bind_3 Location: 138230-138506 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 38230-1 38506 bp Feature: domain Description: INT_P4_C Location: 138881-139448 bp Feature: domain Description: INT_P4_C Location: 1 38881 -1 39448 bp Feature: gene Location: 139862-140890 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 140006-140582 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 40006-1 40582 bp Feature: gene Location: 140892-142271 bp Feature: domain Description: ABC_ATPase Location: 140934-141036 bp Feature: domain Description: ABC_ATPase Location: 1 40934-1 41 036 bp Feature: domain Description: ABC_ATPase Location: 141459-141687 bp Feature: domain Description: ABC_ATPase Location: 1 41 459-1 41 687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S66_mccF_like (cd07062), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, ABC_ATPase (pfam09818)

Seq: JACJDS010000049.1 Pseudoalteromonas sp. SR44-8 NODE_49_length_38198_cov_8.2, whole genome shotgun sequence (38198 bp)
Overview 1 RT 1: 24909-29914 bp Neighborhood of RT #1 [24909, 29914] PRK10702 RVT-GII GIIM PRK10702 Feature: gene Location: 24909-25088 bp Feature: domain Description: PRK10702 Location: 24915-25083 bp Feature: domain Description: PRK10702 Location: 2 4915-2 5083 bp Feature: gene Location: 25437-26441 bp Feature: gene Location: 26521-27876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26815-27439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6815-2 7439 bp Feature: domain Description: GIIM Note: maturase Location: 27478-27697 bp Feature: domain Description: GIIM Note: maturase Location: 2 7478-2 7697 bp Feature: gene Location: 28558-28884 bp Feature: domain Description: PRK10702 Location: 28636-28879 bp Feature: domain Description: PRK10702 Location: 2 8636-2 8879 bp Feature: gene Location: 29165-29914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10702 (endonuclease III; Provisional), RVT-GII, GIIM (pfam08388)