myRT

myRT report for GCA_014163675.1_ASM1416367v1

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Seq: JACJDT010000101.1 Pseudoalteromonas sp. SR44-5 NODE_101_length_2775_cov_7.4, whole genome shotgun sequence (2775 bp)
Overview 1 RT 1: 223-2238 bp Neighborhood of RT #1 [223, 2238] PRK10738 RVT-GII GIIM Feature: gene Location: 223-630 bp Feature: domain Description: PRK10738 Location: 226-613 bp Feature: domain Description: PRK1 0738 Location: 226-61 3 bp Feature: gene Location: 699-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 993-1 61 7 bp Feature: domain Description: GIIM Note: maturase Location: 1656-1875 bp Feature: domain Description: GIIM Note: maturase Location: 1 656-1 875 bp Feature: gene Location: 2107-2238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10738 (OsmC family protein), RVT-GII, GIIM (pfam08388)

Seq: JACJDT010000001.1 Pseudoalteromonas sp. SR44-5 NODE_1_length_273578_cov_10.7, whole genome shotgun sequence (273578 bp)
Overview 1 RT 1: 254107-263117 bp Neighborhood of RT #1 [254107, 263701] HsdM RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like RVT-UG1 nitrilase_Rim1_like CDC6 McrB Feature: gene Location: 254107-255579 bp Feature: domain Description: HsdM Location: 254113-255562 bp Feature: domain Description: HsdM Location: 2 54113-2 55562 bp Feature: gene Location: 255579-257321 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 255930-256401 bp Feature: domain Description: RMtype1_S_Sau1132 ORF3780P-TRD2 -CR2 _like Location: 2 55930-2 56401 bp Feature: domain Description: RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like Location: 257004-257280 bp Feature: domain Description: RMtype1_S_Sau1132 ORF3780P-TRD2 -CR2 _like Location: 2 57004-2 572 80 bp Feature: gene Location: 257340-261017 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 257961-258456 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 57961-2 58456 bp Feature: domain Description: nitrilase_Rim1_like Location: 260409-260709 bp Feature: domain Description: nitrilase_Rim1_like Location: 2 60409-2 60709 bp Feature: gene Location: 261014-261466 bp Feature: gene Location: 261494-263701 bp Feature: domain Description: CDC6 Location: 262400-262484 bp Feature: domain Description: CDC6 Location: 2 62 400-2 62 484 bp Feature: domain Description: McrB Location: 262829-263117 bp Feature: domain Description: McrB Location: 2 62 82 9-2 63117 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_Sau1132ORF3780P-TRD2-CR2_like (cd17266), RVT-UG1, nitrilase_Rim1_like (cd07574), CDC6 (COG1474), McrB (COG4054)