myRT

myRT report for GCA_014163885.1_ASM1416388v1

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Seq: JACJED010000027.1 Pseudoalteromonas sp. SR43-2 NODE_27_length_54226_cov_8.1, whole genome shotgun sequence (54226 bp)
Overview 1 RT 1: 42969-46220 bp Neighborhood of RT #1 [42969, 46243] HTH_XRE RVT-Retrons Lysophospholipase_L1_like Feature: gene Location: 42969-43202 bp Feature: gene Location: 43251-43544 bp Feature: domain Description: HTH_XRE Location: 43263-43428 bp Feature: domain Description: HTH_XRE Location: 43263-43428 bp Feature: gene Location: 43615-44475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43669-44239 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43669-44239 bp Feature: gene Location: 44666-45154 bp Feature: gene Location: 45620-46243 bp Feature: domain Description: Lysophospholipase_L1_like Location: 45698-46220 bp Feature: domain Description: Lysophospholipase_L1 _like Location: 45698-46220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, Lysophospholipase_L1_like (cd01822)

Seq: JACJED010000003.1 Pseudoalteromonas sp. SR43-2 NODE_3_length_293752_cov_11.0, whole genome shotgun sequence (293752 bp)
Overview 1 RT 1: 219575-224826 bp Neighborhood of RT #1 [219575, 225350] Usp RVT-Retrons AAA_21 PRK11071 Feature: gene Location: 219575-220006 bp Feature: domain Description: Usp Location: 219590-220004 bp Feature: domain Description: Usp Location: 2 19590-2 2 0004 bp Feature: gene Location: 220214-220363 bp Feature: gene Location: 220610-221680 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 220754-221297 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 0754-2 2 12 97 bp Feature: gene Location: 221857-223947 bp Feature: domain Description: AAA_21 Location: 221932-222868 bp Feature: domain Description: AAA_2 1 Location: 2 2 1932 -2 2 2 868 bp Feature: gene Location: 224010-225350 bp Feature: domain Description: PRK11071 Location: 224562-224826 bp Feature: domain Description: PRK11071 Location: 2 2 4562 -2 2 482 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Usp (pfam00582), RVT-Retrons, AAA_21 (pfam13304), PRK11071 (esterase YqiA; Provisional)