myRT

myRT report for GCA_014164315.1_ASM1416431v1

Download annotations/find similar RTs

Seq: JACJEW010000105.1 Pseudoalteromonas sp. SG44-1 NODE_105_length_5878_cov_9.9, whole genome shotgun sequence (5878 bp)
Overview 1 RT 1: 2358-5747 bp Neighborhood of RT #1 [2358, 5747] KTSC RVT-Retrons Dcc1 Feature: gene Location: 2358-2588 bp Feature: gene Location: 2608-3510 bp Feature: domain Description: KTSC Location: 3262-3430 bp Feature: domain Description: KTSC Location: 3262-3430 bp Feature: gene Location: 3825-4853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4050-4575 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4050-4575 bp Feature: gene Location: 5011-5352 bp Feature: domain Description: Dcc1 Location: 5056-5293 bp Feature: domain Description: Dcc1 Location: 5056-5293 bp Feature: gene Location: 5355-5747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KTSC (pfam13619), RVT-Retrons, Dcc1 (pfam09724)

Seq: JACJEW010000156.1 Pseudoalteromonas sp. SG44-1 NODE_156_length_1744_cov_36.9, whole genome shotgun sequence (1744 bp)
Overview 1 RT 1: 3-1179 bp Neighborhood of RT #1 [3, 1196] RVT-GII GIIM Feature: gene Location: 3-1196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 297-921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 97-92 1 bp Feature: domain Description: GIIM Note: maturase Location: 960-1179 bp Feature: domain Description: GIIM Note: maturase Location: 960-1179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)