myRT

myRT report for GCA_014164835.1_ASM1416483v1

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Seq: JACJFQ010000063.1 Serratia sp. OS31 NODE_63_length_9586_cov_17.418681, whole genome shotgun sequence (9586 bp)
Overview 1 RT 1: 3695-7243 bp Neighborhood of RT #1 [3695, 7243] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM HNHc Feature: gene Location: 3695-4180 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3701-4025 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3701 -4025 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4046-4154 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4046-41 54 bp Feature: gene Location: 4515-4727 bp Feature: gene Location: 4931-6664 bp Feature: RT Description: RVT_N Location: 4976-5213 bp Feature: RT Description: RVT_N Location: 4976-521 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5264-5927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5264-5927 bp Feature: domain Description: GIIM Note: maturase Location: 5993-6227 bp Feature: domain Description: GIIM Note: maturase Location: 5993-6227 bp Feature: domain Description: HNHc Note: nucleases Location: 6452-6611 bp Feature: domain Description: HNHc Note: nucleases Location: 6452-661 1 bp Feature: gene Location: 6707-6889 bp Feature: gene Location: 6959-7243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)