myRT

myRT report for GCA_014174255.1_ASM1417425v1

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Seq: JABEQJ010000017.1 Gluconacetobacter sacchari strain LMG 19747 contig00017, whole genome shotgun sequence (105466 bp)
Overview 1 RT 1: 56812-61637 bp Neighborhood of RT #1 [56812, 61639] RVT-GII Intron_maturas2 DUF2000 Feature: gene Location: 56812-57252 bp Feature: gene Location: 57336-57653 bp Feature: gene Location: 57798-59645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58068-58896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58068-58896 bp Feature: domain Description: Intron_maturas2 Location: 58980-59268 bp Feature: domain Description: Intron_maturas2 Location: 58980-59268 bp Feature: gene Location: 60232-61083 bp Feature: gene Location: 61322-61639 bp Feature: domain Description: DUF2000 Location: 61331-61637 bp Feature: domain Description: DUF2000 Location: 61 331 -61 637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), DUF2000 (pfam09391)

Seq: JABEQJ010000070.1 Gluconacetobacter sacchari strain LMG 19747 contig00070, whole genome shotgun sequence (3958 bp)
Overview 1 RT 1: 2-1727 bp Neighborhood of RT #1 [2, 1727] PHA02517 RVT-GII Feature: gene Location: 2-337 bp Feature: domain Description: PHA02517 Location: 23-335 bp Feature: domain Description: PHA02 517 Location: 2 3-335 bp Feature: gene Location: 341-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632-824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 632 -82 4 bp Feature: gene Location: 1059-1388 bp Feature: gene Location: 1434-1727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: JABEQJ010000072.1 Gluconacetobacter sacchari strain LMG 19747 contig00072, whole genome shotgun sequence (3774 bp)
Overview 1 RT 1: 441-3773 bp Neighborhood of RT #1 [441, 3772] TnpB_IS66 COG3436 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 441-788 bp Feature: domain Description: TnpB_IS66 Location: 468-756 bp Feature: domain Description: TnpB_IS66 Location: 468-756 bp Feature: gene Location: 852-1514 bp Feature: domain Description: COG3436 Location: 1155-1467 bp Feature: domain Description: COG3 43 6 Location: 1155-1467 bp Feature: gene Location: 2007-3266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2211-2868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2211-2868 bp Feature: domain Description: GIIM Note: maturase Location: 2946-3159 bp Feature: domain Description: GIIM Note: maturase Location: 2946-3 159 bp Feature: gene Location: 3305-3772 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3326-3773 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 3 26-3 773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), COG3436 (Transposase )