myRT

myRT report for GCA_014182345.1_ASM1418234v1

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Seq: JABXOA010000001.1 Klebsiella pneumoniae strain C2166 tig00000001, whole genome shotgun sequence (5482153 bp)
Overview 1 RT 1: 62971-67079 bp 2 RT 2: 213618-219495 bp 3 RT 3: 1449387-1454269 bp 4 RT 4: 1912382-1916137 bp 5 RT 5: 2076277-2080313 bp 6 RT 6: 5069387-5072636 bp 7 RT 7: 5436439-5442847 bp Neighborhood of RT #1 [62971, 67081] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [213618, 219497] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #3 [1449387, 1454274] YccC PRK10016 RVT-GII dacD Neighborhood of RT #4 [1912382, 1916137] Terminase_2 RVT-GII Neighborhood of RT #5 [2076277, 2081167] DinI RVT-GII Phage_GPA Neighborhood of RT #6 [5069387, 5073028] YbjK int RVT-GII Neighborhood of RT #7 [5436439, 5442847] AbiH PRK05318 RVT-GII PRK10597 Feature: gene Location: 62971-63213 bp Feature: domain Description: DinI Location: 63022-63202 bp Feature: domain Description: DinI Location: 63022-63202 bp Feature: gene Location: 63228-63374 bp Feature: gene Location: 63828-65315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64233-64923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64233-64923 bp Feature: gene Location: 65394-65813 bp Feature: domain Description: PRK10276 Location: 65397-65808 bp Feature: domain Description: PRK1 0276 Location: 65397-65808 bp Feature: gene Location: 65816-67081 bp Feature: domain Description: umuC Location: 65819-67079 bp Feature: domain Description: umuC Location: 6581 9-67079 bp Feature: gene Location: 213618-214334 bp Feature: domain Description: Rve Location: 213633-214278 bp Feature: domain Description: Rve Location: 21 3633-21 4278 bp Feature: gene Location: 214340-214849 bp Feature: domain Description: PinE Location: 214388-214841 bp Feature: domain Description: PinE Location: 21 4388-21 4841 bp Feature: gene Location: 216244-217731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216649-217339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 6649-21 7339 bp Feature: gene Location: 217811-218230 bp Feature: domain Description: PRK10276 Location: 217814-218225 bp Feature: domain Description: PRK1 0276 Location: 21 781 4-21 8225 bp Feature: gene Location: 218232-219497 bp Feature: domain Description: umuC Location: 218235-219495 bp Feature: domain Description: umuC Location: 21 8235-21 9495 bp Feature: gene Location: 1449387-1450445 bp Feature: domain Description: YccC Location: 1449393-1450431 bp Feature: domain Description: YccC Location: 1 449393-1 450431 bp Feature: gene Location: 1450544-1451017 bp Feature: domain Description: PRK10016 Location: 1450547-1451006 bp Feature: domain Description: PRK1 001 6 Location: 1 450547-1 451 006 bp Feature: gene Location: 1451099-1452583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1451501-1452191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 451 501 -1 4521 91 bp Feature: gene Location: 1452592-1452759 bp Feature: gene Location: 1453105-1454274 bp Feature: domain Description: dacD Location: 1453114-1454269 bp Feature: domain Description: dacD Location: 1 4531 1 4-1 454269 bp Feature: gene Location: 1912382-1912966 bp Feature: domain Description: Terminase_2 Location: 1912427-1912892 bp Feature: domain Description: Terminase_2 Location: 1 91 2427-1 91 2892 bp Feature: gene Location: 1913044-1913301 bp Feature: gene Location: 1913702-1915189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914107-1914797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 91 41 07-1 91 4797 bp Feature: gene Location: 1915286-1915624 bp Feature: gene Location: 1915820-1916137 bp Feature: gene Location: 2076277-2076510 bp Feature: domain Description: DinI Location: 2076322-2076505 bp Feature: domain Description: DinI Location: 2076322-2076505 bp Feature: gene Location: 2076522-2076710 bp Feature: gene Location: 2076818-2078302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2077220-2077910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2077220-207791 0 bp Feature: gene Location: 2078311-2078478 bp Feature: gene Location: 2078783-2081167 bp Feature: domain Description: Phage_GPA Location: 2079347-2080313 bp Feature: domain Description: Phage_GPA Location: 2079347-208031 3 bp Feature: gene Location: 5069387-5069950 bp Feature: domain Description: YbjK Location: 5069393-5069930 bp Feature: domain Description: YbjK Location: 5069393-5069930 bp Feature: gene Location: 5070073-5071125 bp Feature: domain Description: int Location: 5070076-5071075 bp Feature: domain Description: int Location: 5070076-5071 075 bp Feature: gene Location: 5071541-5073028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5071946-5072636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5071 946-5072636 bp Feature: gene Location: 5436439-5437308 bp Feature: domain Description: AbiH Location: 5436448-5437216 bp Feature: domain Description: AbiH Location: 5436448-543721 6 bp Feature: gene Location: 5438547-5439908 bp Feature: domain Description: PRK05318 Location: 5438571-5439870 bp Feature: domain Description: PRK0531 8 Location: 5438571 -5439870 bp Feature: gene Location: 5440746-5442233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441151-5441841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5441 1 51 -5441 841 bp Feature: gene Location: 5442312-5442545 bp Feature: domain Description: PRK10597 Location: 5442315-5442540 bp Feature: domain Description: PRK1 0597 Location: 544231 5-5442540 bp Feature: gene Location: 5442590-5442847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), Terminase_2 (pfam03592)
Phage_GPA (pfam05840), YbjK (COG3226), int (PHA02601), AbiH (pfam14253), PRK05318 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: JABXOA010000002.1 Klebsiella pneumoniae strain C2166 tig00000037, whole genome shotgun sequence (322226 bp)
Overview 1 RT 1: 199605-203467 bp Neighborhood of RT #1 [199605, 203467] HHA RVT-GII INT_Cre_C Feature: gene Location: 199605-199856 bp Feature: domain Description: HHA Location: 199653-199836 bp Feature: domain Description: HHA Location: 199653-199836 bp Feature: gene Location: 199891-200349 bp Feature: gene Location: 200374-201861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200779-201469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 00779-2 01469 bp Feature: gene Location: 201948-203084 bp Feature: domain Description: INT_Cre_C Location: 202371-203025 bp Feature: domain Description: INT_Cre_C Location: 2 02 371-2 0302 5 bp Feature: gene Location: 203150-203467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: JABXOA010000004.1 Klebsiella pneumoniae strain C2166 tig00000346, whole genome shotgun sequence (21798 bp)
Overview 1 RT 1: 5513-9887 bp 2 RT 2: 17479-21544 bp Neighborhood of RT #1 [5513, 9901] tolA RVT-GII Cloacin E2R135 Neighborhood of RT #2 [17479, 21600] tolA RVT-GII Cloacin Cloacin Feature: gene Location: 5513-5884 bp Feature: domain Description: tolA Location: 5621-5882 bp Feature: domain Description: tolA Location: 5621-5882 bp Feature: gene Location: 6158-6403 bp Feature: gene Location: 7048-8310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7453-8143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7453 -8143 bp Feature: gene Location: 8343-8534 bp Feature: gene Location: 8639-9901 bp Feature: domain Description: Cloacin Location: 8771-9596 bp Feature: domain Description: Cloacin Location: 8771-9596 bp Feature: domain Description: E2R135 Location: 9605-9887 bp Feature: domain Description: E2R13 5 Location: 9605-9887 bp Feature: gene Location: 17479-17850 bp Feature: domain Description: tolA Location: 17587-17848 bp Feature: domain Description: tolA Location: 17587-17848 bp Feature: gene Location: 18124-18369 bp Feature: gene Location: 19014-20501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19419-20109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19419-20109 bp Feature: gene Location: 20606-21244 bp Feature: domain Description: Cloacin Location: 20735-21242 bp Feature: domain Description: Cloacin Location: 2073 5-21242 bp Feature: gene Location: 21241-21600 bp Feature: domain Description: Cloacin Location: 21244-21544 bp Feature: domain Description: Cloacin Location: 21244-21544 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tolA (PRK09510), RVT-GII, Cloacin (pfam03515), E2R135 (pfam11570)

Seq: JABXOA010000005.1 Klebsiella pneumoniae strain C2166 tig00000347, whole genome shotgun sequence (11870 bp)
Overview 1 RT 1: 6125-8507 bp Neighborhood of RT #1 [6125, 8507] RVT-GII Feature: gene Location: 6125-6370 bp Feature: gene Location: 6676-7311 bp Feature: gene Location: 7315-7728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7420-7648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 20-764 8 bp Feature: gene Location: 7804-8220 bp Feature: gene Location: 8280-8507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABXOA010000006.1 Klebsiella pneumoniae strain C2166 tig00000348, whole genome shotgun sequence (55044 bp)
Overview 1 RT 1: 39322-42844 bp Neighborhood of RT #1 [39322, 42861] StbA RVT-GII PRK10276 Feature: gene Location: 39322-40293 bp Feature: domain Description: StbA Location: 39325-40270 bp Feature: domain Description: StbA Location: 39325 -40270 bp Feature: gene Location: 40593-40814 bp Feature: gene Location: 41015-42025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41420-42017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41420-42017 bp Feature: gene Location: 42031-42363 bp Feature: gene Location: 42430-42861 bp Feature: domain Description: PRK10276 Location: 42481-42844 bp Feature: domain Description: PRK10276 Location: 42481-42844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: JABXOA010000007.1 Klebsiella pneumoniae strain C2166 tig00000349, whole genome shotgun sequence (72375 bp)
Overview 1 RT 1: 31048-34562 bp Neighborhood of RT #1 [31048, 34562] StbA group_II_RT_mat RVT-GII Feature: gene Location: 31048-32019 bp Feature: domain Description: StbA Location: 31051-31996 bp Feature: domain Description: StbA Location: 31051-31996 bp Feature: gene Location: 32268-32744 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 32325-32610 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 32325-326 10 bp Feature: gene Location: 32744-33754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33149-33746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33149-33746 bp Feature: gene Location: 33760-33927 bp Feature: gene Location: 34167-34562 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT StbA (pfam06406), group_II_RT_mat (TIGR04416), RVT-GII