myRT

myRT report for GCA_014191065.1_ASM1419106v1

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Seq: JACHVZ010000003.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_03, whole genome shotgun sequence (469692 bp)
Overview 1 RT 1: 136509-143151 bp Neighborhood of RT #1 [136509, 143330] TIGR03607 TIGR03607 PHA02517 RVT-GII GIIM InsE Phytase-like Feature: gene Location: 136509-138344 bp Feature: domain Description: TIGR03607 Location: 136767-137616 bp Feature: domain Description: TIGR03607 Location: 1 36767-1 3761 6 bp Feature: domain Description: TIGR03607 Location: 137805-137904 bp Feature: domain Description: TIGR03607 Location: 1 37805-1 37904 bp Feature: gene Location: 138703-139593 bp Feature: domain Description: PHA02517 Location: 138769-139576 bp Feature: domain Description: PHA0251 7 Location: 1 38769-1 39576 bp Feature: gene Location: 139687-140943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139900-140557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39900-1 40557 bp Feature: domain Description: GIIM Note: maturase Location: 140638-140857 bp Feature: domain Description: GIIM Note: maturase Location: 1 40638-1 40857 bp Feature: gene Location: 141446-141736 bp Feature: domain Description: InsE Location: 141461-141719 bp Feature: domain Description: InsE Location: 1 41 461 -1 41 71 9 bp Feature: gene Location: 141846-143330 bp Feature: domain Description: Phytase-like Location: 142044-143151 bp Feature: domain Description: Phytase-like Location: 1 42044-1 431 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03607 (patatin-related protein), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), Phytase-like (pfam13449)

Seq: JACHVZ010000007.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_07, whole genome shotgun sequence (411267 bp)
Overview 1 RT 1: 143136-148302 bp Neighborhood of RT #1 [143136, 148302] Dcm RVT-DGRs Avd_like Feature: gene Location: 143136-144356 bp Feature: gene Location: 144377-146200 bp Feature: domain Description: Dcm Location: 144413-146150 bp Feature: domain Description: Dcm Location: 144413-146150 bp Feature: gene Location: 146205-147551 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 146628-147315 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14662 8-147315 bp Feature: gene Location: 147635-147919 bp Feature: domain Description: Avd_like Location: 147662-147908 bp Feature: domain Description: Avd_like Location: 147662 -147908 bp Feature: gene Location: 147934-148302 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), RVT-DGRs, Avd_like (cd16376)

Seq: JACHVZ010000018.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_18, whole genome shotgun sequence (181290 bp)
Overview 1 RT 1: 45042-48616 bp Neighborhood of RT #1 [45042, 48624] RVT-GII GIIM LysR ETR_like Feature: gene Location: 45042-45275 bp Feature: gene Location: 45348-45575 bp Feature: gene Location: 45760-46299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45805-45919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45805-45919 bp Feature: domain Description: GIIM Note: maturase Location: 45994-46216 bp Feature: domain Description: GIIM Note: maturase Location: 45994-46216 bp Feature: gene Location: 46592-47494 bp Feature: domain Description: LysR Location: 46601-47474 bp Feature: domain Description: LysR Location: 46601-47474 bp Feature: gene Location: 47626-48624 bp Feature: domain Description: ETR_like Location: 47650-48616 bp Feature: domain Description: ETR_like Location: 47650-48616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LysR (COG0583), ETR_like (cd05282)

Seq: JACHVZ010000023.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_23, whole genome shotgun sequence (135934 bp)
Overview 1 RT 1: 105776-111759 bp Neighborhood of RT #1 [105776, 112100] RVT-Retrons Trypsin_2 AbiTii Feature: gene Location: 105776-107386 bp Feature: gene Location: 108230-108445 bp Feature: gene Location: 108551-110377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108704-109313 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 108704 -109313 bp Feature: domain Description: Trypsin_2 Location: 109784-110252 bp Feature: domain Description: Trypsin_2 Location: 109784 -110252 bp Feature: gene Location: 110830-111078 bp Feature: gene Location: 111198-112100 bp Feature: domain Description: AbiTii Location: 111210-111759 bp Feature: domain Description: AbiTii Location: 111210-111759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), AbiTii (pfam18864)

Seq: JACHVZ010000044.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_44, whole genome shotgun sequence (2249 bp)
Overview 1 RT 1: 1-1909 bp Neighborhood of RT #1 [1, 2091] RVT_N RVT-GII GIIM Feature: gene Location: 1-273 bp Feature: gene Location: 619-2091 bp Feature: RT Description: RVT_N Location: 694-937 bp Feature: RT Description: RVT_N Location: 694-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1624 bp Feature: domain Description: GIIM Note: maturase Location: 1675-1909 bp Feature: domain Description: GIIM Note: maturase Location: 1675 -1909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACHVZ010000045.1 Paraburkholderia silvatlantica strain SRMrh-85 Ga0215859_45, whole genome shotgun sequence (1887 bp)
Overview 1 RT 1: 301-1721 bp Neighborhood of RT #1 [301, 1810] RVT-GII GIIM Feature: gene Location: 301-570 bp Feature: gene Location: 563-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 767-1427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76 7-1427 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1721 bp Feature: domain Description: GIIM Note: maturase Location: 1508-1721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)