myRT

myRT report for GCA_014191725.1_ASM1419172v1

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Seq: JACHWZ010000007.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_07, whole genome shotgun sequence (248001 bp)
Overview 1 RT 1: 246085-247627 bp Neighborhood of RT #1 [246085, 247974] CitB RVT-GII Feature: gene Location: 246085-246690 bp Feature: domain Description: CitB Location: 246097-246682 bp Feature: domain Description: CitB Location: 246097-246682 bp Feature: gene Location: 247210-247377 bp Feature: gene Location: 247381-247974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247450-247627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247450-247627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CitB (TIGR02484), RVT-GII

Seq: JACHWZ010000009.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_09, whole genome shotgun sequence (228982 bp)
Overview 1 RT 1: 226426-228911 bp Neighborhood of RT #1 [226426, 228955] Tra5 RVT-GII GIIM Feature: gene Location: 226426-227358 bp Feature: gene Location: 227534-228130 bp Feature: domain Description: Tra5 Location: 227549-227969 bp Feature: domain Description: Tra5 Location: 2 2 7549-2 2 7969 bp Feature: gene Location: 228422-228955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228497-228638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 8497-2 2 8638 bp Feature: domain Description: GIIM Note: maturase Location: 228713-228911 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 8713-2 2 8911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388)

Seq: JACHWZ010000010.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_10, whole genome shotgun sequence (210332 bp)
Overview 1 RT 1: 3-822 bp Neighborhood of RT #1 [3, 911] RVT_N RVT-GII Feature: gene Location: 3-911 bp Feature: domain Description: RVT_N Location: 51-294 bp Feature: domain Description: RVT_N Location: 51-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 9-822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACHWZ010000015.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_15, whole genome shotgun sequence (133909 bp)
Overview 1 RT 1: 71321-75572 bp Neighborhood of RT #1 [71321, 75601] catalase_clade_3 RVT-GII Feature: gene Location: 71321-72766 bp Feature: domain Description: catalase_clade_3 Location: 71471-72752 bp Feature: domain Description: catalase_clade_3 Location: 714 71-72752 bp Feature: gene Location: 74580-74723 bp Feature: gene Location: 75071-75601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75299-75572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75299-75572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT catalase_clade_3 (cd08156), RVT-GII

Seq: JACHWZ010000021.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_21, whole genome shotgun sequence (98865 bp)
Overview 1 RT 1: 3-4071 bp Neighborhood of RT #1 [3, 4124] RVT-GII integrase_gron Feature: gene Location: 3-776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192-693 bp Feature: gene Location: 2479-2835 bp Feature: gene Location: 3342-4124 bp Feature: domain Description: integrase_gron Location: 3348-4071 bp Feature: domain Description: integrase_gron Location: 3348-4071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, integrase_gron (TIGR02249)

Seq: JACHWZ010000042.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_42, whole genome shotgun sequence (10164 bp)
Overview 1 RT 1: 8487-9971 bp Neighborhood of RT #1 [8487, 10162] NTR_TIMP_like RVT-GII GIIM Feature: gene Location: 8487-8864 bp Feature: domain Description: NTR_TIMP_like Location: 8544-8835 bp Feature: domain Description: NTR_TIMP_like Location: 8544-8835 bp Feature: gene Location: 8980-9420 bp Feature: gene Location: 9488-10162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9581-9725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9581-9725 bp Feature: domain Description: GIIM Note: maturase Location: 9767-9971 bp Feature: domain Description: GIIM Note: maturase Location: 976 7-9971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTR_TIMP_like (cd03577), RVT-GII, GIIM (pfam08388)

Seq: JACHWZ010000046.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_46, whole genome shotgun sequence (6681 bp)
Overview 1 RT 1: 4384-6593 bp Neighborhood of RT #1 [4384, 6679] HTH_32 RVT-GII Feature: gene Location: 4384-5211 bp Feature: domain Description: HTH_32 Location: 4735-4957 bp Feature: domain Description: HTH_32 Location: 47 35-4957 bp Feature: gene Location: 5443-5622 bp Feature: gene Location: 5735-6679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6008-6593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6008-6593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), RVT-GII

Seq: JACHWZ010000052.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_52, whole genome shotgun sequence (4811 bp)
Overview 1 RT 1: 361-4033 bp Neighborhood of RT #1 [361, 4809] RVT-GII GIIM Alginate_lyase Feature: gene Location: 361-585 bp Feature: gene Location: 1115-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-2054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403-2054 bp Feature: domain Description: GIIM Note: maturase Location: 2141-2342 bp Feature: domain Description: GIIM Note: maturase Location: 2141-2342 bp Feature: gene Location: 3043-4809 bp Feature: domain Description: Alginate_lyase Location: 3304-4033 bp Feature: domain Description: Alginate_lyase Location: 3304-4033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Alginate_lyase (pfam05426)

Seq: JACHWZ010000053.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_53, whole genome shotgun sequence (4150 bp)
Overview 1 RT 1: 3-1615 bp Neighborhood of RT #1 [3, 1683] RVT-GII GIIM COG3791 Feature: gene Location: 3-773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 6-243 bp Feature: domain Description: GIIM Note: maturase Location: 297-525 bp Feature: domain Description: GIIM Note: maturase Location: 29 7-525 bp Feature: gene Location: 910-1164 bp Feature: gene Location: 1267-1683 bp Feature: domain Description: COG3791 Location: 1321-1615 bp Feature: domain Description: COG379 1 Location: 1321-1615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3791 (Uncharacterized conserved protein )

Seq: JACHWZ010000054.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_54, whole genome shotgun sequence (4110 bp)
Overview 1 RT 1: 2182-4019 bp Neighborhood of RT #1 [2182, 4108] PRiA4_ORF3 RVT-GII Feature: gene Location: 2182-2604 bp Feature: domain Description: PRiA4_ORF3 Location: 2194-2590 bp Feature: domain Description: PRiA4_ORF3 Location: 2194-2590 bp Feature: gene Location: 2982-3155 bp Feature: gene Location: 3152-4108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3545-4019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3545-4019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRiA4_ORF3 (pfam07929), RVT-GII

Seq: JACHWZ010000063.1 Microbulbifer rhizosphaerae strain CECT 8799 Ga0372436_63, whole genome shotgun sequence (1871 bp)
Overview 1 RT 1: 79-1695 bp Neighborhood of RT #1 [79, 1695] RVT-GII GIIM Feature: gene Location: 79-1323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-940 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1240 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1240 bp Feature: gene Location: 1474-1695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)