myRT

myRT report for GCA_014191855.1_ASM1419185v1

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Seq: BJHF01000002.1 Deltaproteobacteria bacterium LBMAG_Deltaproteobacteria_hypo.bin1 DNA, sequence002, whole genome shotgun sequence (166694 bp)
Overview 1 RT 1: 69241-78358 bp Neighborhood of RT #1 [69241, 78387] DUF3883 Phage_int_SAM_3 INT_Rci_Hp1_C RVT-DGRs Avd_like HRDC Feature: gene Location: 69241-74778 bp Feature: domain Description: DUF3883 Location: 74464-74656 bp Feature: domain Description: DUF3883 Location: 74464-74656 bp Feature: gene Location: 75009-76133 bp Feature: domain Description: Phage_int_SAM_3 Location: 75198-75348 bp Feature: domain Description: Phage_int_SAM_3 Location: 751 98-75348 bp Feature: domain Description: INT_Rci_Hp1_C Location: 75534-76032 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 75534-76032 bp Feature: gene Location: 76561-77559 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76762-77359 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 76762-77359 bp Feature: gene Location: 77556-77903 bp Feature: domain Description: Avd_like Location: 77589-77886 bp Feature: domain Description: Avd_like Location: 77589-77886 bp Feature: gene Location: 77896-78387 bp Feature: domain Description: HRDC Location: 78163-78358 bp Feature: domain Description: HRDC Location: 781 63-78358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3883 (pfam13020), Phage_int_SAM_3 (pfam14659), INT_Rci_Hp1_C (cd00796), RVT-DGRs, Avd_like (cd16376), HRDC (smart00341)

Seq: BJHF01000017.1 Deltaproteobacteria bacterium LBMAG_Deltaproteobacteria_hypo.bin1 DNA, sequence017, whole genome shotgun sequence (73333 bp)
Overview 1 RT 1: 55676-63574 bp Neighborhood of RT #1 [55676, 63591] TPR_12 RVT-CRISPR Cas1_I-II-III PDDEXK_9 SpoU Feature: gene Location: 55676-56905 bp Feature: domain Description: TPR_12 Location: 56321-56474 bp Feature: domain Description: TPR_12 Location: 5632 1-56474 bp Feature: gene Location: 57787-58005 bp Feature: gene Location: 58017-61538 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 59451-60066 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 59451-60066 bp Feature: domain Description: Cas1_I-II-III Location: 60543-61503 bp Feature: domain Description: Cas1_I-II-III Location: 60543-61503 bp Feature: gene Location: 61864-62364 bp Feature: domain Description: PDDEXK_9 Location: 62044-62347 bp Feature: domain Description: PDDEXK_9 Location: 62 044-62 347 bp Feature: gene Location: 62734-63591 bp Feature: domain Description: SpoU Location: 62869-63574 bp Feature: domain Description: SpoU Location: 62 869-63574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_12 (pfam13424), RVT-CRISPR, Cas1_I-II-III (cl00656), PDDEXK_9 (pfam08011), SpoU (COG0566)

Seq: BJHF01000062.1 Deltaproteobacteria bacterium LBMAG_Deltaproteobacteria_hypo.bin1 DNA, sequence062, whole genome shotgun sequence (38505 bp)
Overview 1 RT 1: 5135-10849 bp Neighborhood of RT #1 [5135, 12351] Flp pro_imino_pep_1 RVT-Retrons HNHc STKc_PknB_like Feature: gene Location: 5135-5269 bp Feature: domain Description: Flp Location: 5144-5261 bp Feature: domain Description: Flp Location: 5144-5261 bp Feature: gene Location: 5332-6279 bp Feature: domain Description: pro_imino_pep_1 Location: 5350-6259 bp Feature: domain Description: pro_imino_pep_1 Location: 53 50-6259 bp Feature: gene Location: 6133-7794 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6919-7561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6919-7561 bp Feature: gene Location: 8119-9174 bp Feature: domain Description: HNHc Note: nucleases Location: 8914-9076 bp Feature: domain Description: HNHc Note: nucleases Location: 8914-9076 bp Feature: gene Location: 9250-12351 bp Feature: domain Description: STKc_PknB_like Location: 10255-10849 bp Feature: domain Description: STKc_PknB_like Location: 10255-10849 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flp (COG3847), pro_imino_pep_1 (TIGR01249), RVT-Retrons, HNHc (smart00507), STKc_PknB_like (cd14014)