myRT

myRT report for GCA_014193175.1_ASM1419317v1

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Seq: JACHYX010000005.1 Rhizobium sp. BK077 Ga0365250_05, whole genome shotgun sequence (464314 bp)
Overview 1 RT 1: 146060-153294 bp Neighborhood of RT #1 [146060, 153341] APH APH RVT-UG2 MPP_MS158 FtsH_fam Feature: gene Location: 146060-146845 bp Feature: domain Description: APH Location: 146168-146372 bp Feature: domain Description: APH Location: 1 461 68-1 46372 bp Feature: domain Description: APH Location: 146384-146543 bp Feature: domain Description: APH Location: 1 46384-1 46543 bp Feature: gene Location: 146931-147890 bp Feature: gene Location: 148464-149903 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 148644-149556 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 48644-1 49556 bp Feature: gene Location: 150328-151140 bp Feature: domain Description: MPP_MS158 Location: 150343-151087 bp Feature: domain Description: MPP_MS1 58 Location: 1 50343-1 51 087 bp Feature: gene Location: 151353-153341 bp Feature: domain Description: FtsH_fam Location: 152103-153294 bp Feature: domain Description: FtsH_fam Location: 1 521 03-1 53294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT APH (pfam01636), RVT-UG2, MPP_MS158 (cd07404), FtsH_fam (TIGR01241)

Seq: JACHYX010000020.1 Rhizobium sp. BK077 Ga0365250_20, whole genome shotgun sequence (72539 bp)
Overview 1 RT 1: 5656-11876 bp Neighborhood of RT #1 [5656, 11876] INT_C_like_1 RVT-Retrons COG3183 Feature: gene Location: 5656-5823 bp Feature: gene Location: 5858-7225 bp Feature: domain Description: INT_C_like_1 Location: 6656-7166 bp Feature: domain Description: INT_C_like_1 Location: 6656-7166 bp Feature: gene Location: 7291-9030 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7429-8059 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 742 9-8059 bp Feature: gene Location: 9242-10312 bp Feature: domain Description: COG3183 Location: 9989-10289 bp Feature: domain Description: COG3183 Location: 9989-102 89 bp Feature: gene Location: 10608-11876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-Retrons, COG3183 (Predicted restriction endonuclease, HNH family )

Seq: JACHYX010000028.1 Rhizobium sp. BK077 Ga0365250_28, whole genome shotgun sequence (35153 bp)
Overview 1 RT 1: 33229-34840 bp Neighborhood of RT #1 [33229, 34932] RVT-GII GIIM Feature: gene Location: 33229-34038 bp Feature: gene Location: 34048-34290 bp Feature: gene Location: 34327-34932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34333-34543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 43 3 3 -3 4543 bp Feature: domain Description: GIIM Note: maturase Location: 34624-34840 bp Feature: domain Description: GIIM Note: maturase Location: 3 4624-3 4840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)