myRT

myRT report for GCA_014194185.1_ASM1419418v1

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Seq: JACJMU010000013.1 UNVERIFIED_ORG: Rhizobium esperanzae strain L15 Ga0394395_13, whole genome shotgun sequence (194723 bp)
Overview 1 RT 1: 964-4607 bp Neighborhood of RT #1 [964, 5188] RVT-UG12 Ser_Recombinase Recombinase Zn_ribbon_recom Feature: gene Location: 964-2409 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1117-1564 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 1 7-1 564 bp Feature: gene Location: 2687-2860 bp Feature: gene Location: 3509-5188 bp Feature: domain Description: Ser_Recombinase Location: 3530-3971 bp Feature: domain Description: Ser_Recombinase Location: 3530-3971 bp Feature: domain Description: Recombinase Location: 4085-4382 bp Feature: domain Description: Recombinase Location: 4085-4382 bp Feature: domain Description: Zn_ribbon_recom Location: 4433-4607 bp Feature: domain Description: Zn_ribbon_recom Location: 4433-4607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, Ser_Recombinase (cl02788), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: JACJMU010000019.1 UNVERIFIED_ORG: Rhizobium esperanzae strain L15 Ga0394395_19, whole genome shotgun sequence (135900 bp)
Overview 1 RT 1: 1902-5093 bp Neighborhood of RT #1 [1902, 5107] TnpB_IS66 HTH_Tnp_1 RVT-GII gabD Feature: gene Location: 1902-2246 bp Feature: domain Description: TnpB_IS66 Location: 1923-2211 bp Feature: domain Description: TnpB_IS66 Location: 192 3-2 2 11 bp Feature: gene Location: 2243-2590 bp Feature: domain Description: HTH_Tnp_1 Location: 2294-2432 bp Feature: domain Description: HTH_Tnp_1 Location: 2 2 94-2 432 bp Feature: gene Location: 2836-3084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2920-3076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 0-3076 bp Feature: gene Location: 3150-3335 bp Feature: gene Location: 3620-5107 bp Feature: domain Description: gabD Location: 3650-5093 bp Feature: domain Description: gabD Location: 3650-5093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), RVT-GII, gabD (PRK11241)