myRT

myRT report for GCA_014194405.1_ASM1419440v1

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Seq: JACJNL010000009.1 UNVERIFIED_ORG: Rhizobium aethiopicum strain SEMIA 4029 Ga0394363_09, whole genome shotgun sequence (282045 bp)
Overview 1 RT 1: 14470-20793 bp Neighborhood of RT #1 [14470, 20793] RVT-Retrons YrpB Feature: gene Location: 14470-14859 bp Feature: gene Location: 15383-16333 bp Feature: gene Location: 16458-17321 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16464-17028 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6464-1 7028 bp Feature: gene Location: 18348-19307 bp Feature: domain Description: YrpB Location: 18351-19296 bp Feature: domain Description: YrpB Location: 1 8351 -1 9296 bp Feature: gene Location: 19594-20793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, YrpB (COG2070)

Seq: JACJNL010000018.1 UNVERIFIED_ORG: Rhizobium aethiopicum strain SEMIA 4029 Ga0394363_18, whole genome shotgun sequence (120564 bp)
Overview 1 RT 1: 96603-100575 bp Neighborhood of RT #1 [96603, 100575] PRK02406 RVT_N RVT-GII GIIM Feature: gene Location: 96603-97088 bp Feature: gene Location: 97103-98098 bp Feature: domain Description: PRK02406 Location: 97106-98066 bp Feature: domain Description: PRK02 406 Location: 97106-98066 bp Feature: gene Location: 98219-99739 bp Feature: RT Description: RVT_N Location: 98228-98441 bp Feature: RT Description: RVT_N Location: 982 2 8-98441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98525-99287 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9852 5-992 87 bp Feature: domain Description: GIIM Note: maturase Location: 99359-99602 bp Feature: domain Description: GIIM Note: maturase Location: 99359-99602 bp Feature: gene Location: 100000-100134 bp Feature: gene Location: 100348-100575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02406 (DNA polymerase IV; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACJNL010000025.1 UNVERIFIED_ORG: Rhizobium aethiopicum strain SEMIA 4029 Ga0394363_25, whole genome shotgun sequence (55849 bp)
Overview 1 RT 1: 2-2369 bp Neighborhood of RT #1 [2, 2383] RVT-GII gabD Feature: gene Location: 2-334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-3 05 bp Feature: gene Location: 426-611 bp Feature: gene Location: 896-2383 bp Feature: domain Description: gabD Location: 926-2369 bp Feature: domain Description: gabD Location: 926-23 69 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, gabD (PRK11241)