myRT

myRT report for GCA_014194605.1_ASM1419460v1

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Seq: JACJNR010000008.1 UNVERIFIED_ORG: Bradyrhizobium lupini strain DSM 30140 Ga0415298_08, whole genome shotgun sequence (407772 bp)
Overview 1 RT 1: 27350-30706 bp Neighborhood of RT #1 [27350, 30828] RVT-GII GIIM HTH_Tnp_1 Tra5 Feature: gene Location: 27350-27484 bp Feature: gene Location: 28103-28243 bp Feature: gene Location: 28249-29547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28504-29158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28504-291 58 bp Feature: domain Description: GIIM Note: maturase Location: 29239-29467 bp Feature: domain Description: GIIM Note: maturase Location: 29239-29467 bp Feature: gene Location: 29724-29978 bp Feature: domain Description: HTH_Tnp_1 Location: 29730-29937 bp Feature: domain Description: HTH_Tnp_1 Location: 29730-29937 bp Feature: gene Location: 29956-30828 bp Feature: domain Description: Tra5 Location: 29998-30706 bp Feature: domain Description: Tra5 Location: 29998-30706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527), Tra5 (COG2801)

Seq: JACJNR010000028.1 UNVERIFIED_ORG: Bradyrhizobium lupini strain DSM 30140 Ga0415298_28, whole genome shotgun sequence (29531 bp)
Overview 1 RT 1: 24010-29316 bp Neighborhood of RT #1 [24010, 29480] RVT-GII RVT-GII Feature: gene Location: 24010-26325 bp Feature: gene Location: 26401-26547 bp Feature: gene Location: 26618-28000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26945-27635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6945-2 7635 bp Feature: gene Location: 28362-28577 bp Feature: gene Location: 29061-29480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29220-29316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 2 0-2 9316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACJNR010000029.1 UNVERIFIED_ORG: Bradyrhizobium lupini strain DSM 30140 Ga0415298_29, whole genome shotgun sequence (23923 bp)
Overview 1 RT 1: 16855-21271 bp Neighborhood of RT #1 [16855, 21333] DDE_Tnp_IS66 RVT-GII GIIM LomR PHA02518 Feature: gene Location: 16855-17031 bp Feature: gene Location: 17159-17884 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17177-17612 bp Feature: domain Description: DDE_Tnp_IS66 Location: 17177-17612 bp Feature: gene Location: 18121-19449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18412-19075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18412-19075 bp Feature: domain Description: GIIM Note: maturase Location: 19141-19363 bp Feature: domain Description: GIIM Note: maturase Location: 19141-193 63 bp Feature: gene Location: 19385-20221 bp Feature: domain Description: LomR Location: 19421-20132 bp Feature: domain Description: LomR Location: 19421-2013 2 bp Feature: gene Location: 20665-21333 bp Feature: domain Description: PHA02518 Location: 20674-21271 bp Feature: domain Description: PHA02518 Location: 20674-21271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), LomR (COG3637), PHA02518 (ParA-like protein; Provisional)

Seq: JACJNR010000036.1 UNVERIFIED_ORG: Bradyrhizobium lupini strain DSM 30140 Ga0415298_36, whole genome shotgun sequence (15109 bp)
Overview 1 RT 1: 1270-7360 bp Neighborhood of RT #1 [1270, 7365] LptD RVT-GII GIIM PRK06215 Feature: gene Location: 1270-3717 bp Feature: domain Description: LptD Location: 1444-3640 bp Feature: domain Description: LptD Location: 14 4 4 -364 0 bp Feature: gene Location: 3735-3926 bp Feature: gene Location: 4518-5699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4719-5376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 719-5376 bp Feature: domain Description: GIIM Note: maturase Location: 5451-5658 bp Feature: domain Description: GIIM Note: maturase Location: 54 51-5658 bp Feature: gene Location: 5894-6184 bp Feature: gene Location: 6628-7365 bp Feature: domain Description: PRK06215 Location: 6637-7360 bp Feature: domain Description: PRK06215 Location: 6637-7360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LptD (COG1452), RVT-GII, GIIM (pfam08388), PRK06215 (hypothetical protein; Provisional)

Seq: JACJNR010000039.1 UNVERIFIED_ORG: Bradyrhizobium lupini strain DSM 30140 Ga0415298_39, whole genome shotgun sequence (9957 bp)
Overview 1 RT 1: 3674-6619 bp Neighborhood of RT #1 [3674, 6619] RVT-GII RVT-GII DDE_Tnp_1_4 Feature: gene Location: 3674-4003 bp Feature: gene Location: 4073-4363 bp Feature: gene Location: 4497-4769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4500-4758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45 00-475 8 bp Feature: gene Location: 4730-5488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4748-5111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4748-5 111 bp Feature: gene Location: 5587-6042 bp Feature: domain Description: DDE_Tnp_1_4 Location: 5623-5797 bp Feature: domain Description: DDE_Tnp_1_4 Location: 5 623-5 797 bp Feature: gene Location: 6215-6619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_1_4 (pfam13701)