myRT

myRT report for GCA_014197625.1_ASM1419762v1

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Seq: JACIFX010000002.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_02, whole genome shotgun sequence (906372 bp)
Overview 1 RT 1: 799300-804140 bp Neighborhood of RT #1 [799300, 804140] PRK10787 BHL RVT-GII Feature: gene Location: 799300-801717 bp Feature: domain Description: PRK10787 Location: 799339-801634 bp Feature: domain Description: PRK1 0787 Location: 799339-801 634 bp Feature: gene Location: 801923-802198 bp Feature: domain Description: BHL Location: 801926-802193 bp Feature: domain Description: BHL Location: 801 926-8021 93 bp Feature: gene Location: 802471-803625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803074-803473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803074-803473 bp Feature: gene Location: 803631-803861 bp Feature: gene Location: 803892-804140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10787 (DNA-binding ATP-dependent protease La; Provisional), BHL (smart00411), RVT-GII

Seq: JACIFX010000006.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_06, whole genome shotgun sequence (408457 bp)
Overview 1 RT 1: 338266-344493 bp Neighborhood of RT #1 [338266, 344493] YbjD SLATT_5 RVT-UG12 Feature: gene Location: 338266-340347 bp Feature: domain Description: YbjD Location: 338563-340342 bp Feature: domain Description: YbjD Location: 338563-340342 bp Feature: gene Location: 340552-341223 bp Feature: domain Description: SLATT_5 Location: 340621-341149 bp Feature: domain Description: SLATT_5 Location: 34062 1-341149 bp Feature: gene Location: 341233-342921 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 341662-342061 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 341662 -342 061 bp Feature: gene Location: 343312-343614 bp Feature: gene Location: 343915-344493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjD (COG3593), SLATT_5 (pfam18160), RVT-UG12

Seq: JACIFX010000011.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_11, whole genome shotgun sequence (147402 bp)
Overview 1 RT 1: 20545-26924 bp Neighborhood of RT #1 [20545, 26924] TIR_2 RVT-Retrons TIR_2 Patatin_and_cPLA2 Feature: gene Location: 20545-21006 bp Feature: gene Location: 21097-21948 bp Feature: domain Description: TIR_2 Location: 21553-21874 bp Feature: domain Description: TIR_2 Location: 21553 -21874 bp Feature: gene Location: 21994-23502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22153-22762 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22153 -22762 bp Feature: domain Description: TIR_2 Location: 23068-23398 bp Feature: domain Description: TIR_2 Location: 23 068-23 3 98 bp Feature: gene Location: 23830-26565 bp Feature: domain Description: Patatin_and_cPLA2 Location: 24559-24739 bp Feature: domain Description: Patatin_and_cPLA2 Location: 24559-2473 9 bp Feature: gene Location: 26658-26924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), RVT-Retrons, Patatin_and_cPLA2 (cl11396)

Seq: JACIFX010000031.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_31, whole genome shotgun sequence (17888 bp)
Overview 1 RT 1: 1407-3594 bp Neighborhood of RT #1 [1407, 3594] RVT-GII GIIM group_II_RT_mat Feature: gene Location: 1407-1685 bp Feature: gene Location: 1745-2140 bp Feature: gene Location: 2050-3042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053-2644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2053-264 4 bp Feature: domain Description: GIIM Note: maturase Location: 2725-2944 bp Feature: domain Description: GIIM Note: maturase Location: 2725-294 4 bp Feature: gene Location: 2871-3308 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2907-3087 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2907-3087 bp Feature: gene Location: 3307-3594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416)

Seq: JACIFX010000049.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_49, whole genome shotgun sequence (5243 bp)
Overview 1 RT 1: 144-2287 bp Neighborhood of RT #1 [144, 2287] RVT-GII Feature: gene Location: 144-464 bp Feature: gene Location: 638-1456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 659-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 9-1079 bp Feature: gene Location: 1555-1878 bp Feature: gene Location: 1883-2287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACIFX010000075.1 Rhizobium mongolense strain SEMIA 4087 Ga0394390_75, whole genome shotgun sequence (1035 bp)
Overview 1 RT 1: 1-787 bp Neighborhood of RT #1 [1, 873] RVT-GII GIIM Feature: gene Location: 1-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-475 bp Feature: domain Description: GIIM Note: maturase Location: 553-787 bp Feature: domain Description: GIIM Note: maturase Location: 553-787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)