myRT

myRT report for GCA_014197795.1_ASM1419779v1

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Seq: JACIGI010000002.1 Roseospira goensis strain JA135 Ga0394285_02, whole genome shotgun sequence (232221 bp)
Overview 1 RT 1: 42298-46852 bp Neighborhood of RT #1 [42298, 46896] EndoU_bacteria RVT-GII GIIM GlpR Feature: gene Location: 42298-42906 bp Feature: gene Location: 42997-43557 bp Feature: domain Description: EndoU_bacteria Location: 43153-43552 bp Feature: domain Description: EndoU_bacteria Location: 431 53-43552 bp Feature: gene Location: 44146-45519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44452-45073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44452-45073 bp Feature: domain Description: GIIM Note: maturase Location: 45121-45340 bp Feature: domain Description: GIIM Note: maturase Location: 451 21 -45340 bp Feature: gene Location: 45642-45935 bp Feature: gene Location: 46096-46896 bp Feature: domain Description: GlpR Location: 46108-46852 bp Feature: domain Description: GlpR Location: 461 08-46852 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EndoU_bacteria (pfam14436), RVT-GII, GIIM (pfam08388), GlpR (COG1349)

Seq: JACIGI010000007.1 Roseospira goensis strain JA135 Ga0394285_07, whole genome shotgun sequence (147204 bp)
Overview 1 RT 1: 14886-21797 bp Neighborhood of RT #1 [14886, 21886] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III CRISPR_Cas6 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 14886-15248 bp Feature: gene Location: 16119-16430 bp Feature: domain Description: Cas2_I_II_III Location: 16167-16383 bp Feature: domain Description: Cas2 _I_II_III Location: 16167-16383 bp Feature: gene Location: 16438-18447 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16687-17284 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 16687-172 84 bp Feature: domain Description: Cas1_I-II-III Location: 17455-18409 bp Feature: domain Description: Cas1_I-II-III Location: 17455-18409 bp Feature: gene Location: 19566-20534 bp Feature: domain Description: CRISPR_Cas6 Location: 20148-20514 bp Feature: domain Description: CRISPR_Cas6 Location: 2 0148-2 0514 bp Feature: gene Location: 20603-21886 bp Feature: domain Description: Arm-DNA-bind_3 Location: 20618-20876 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 0618-2 0876 bp Feature: domain Description: INT_P4_C Location: 21245-21797 bp Feature: domain Description: INT_P4_C Location: 2 12 45-2 1797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)