myRT

myRT report for GCA_014198235.1_ASM1419823v1

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Seq: JACIHD010000016.1 Bradyrhizobium sp. ERR14 Ga0394405_16, whole genome shotgun sequence (153023 bp)
Overview 1 RT 1: 9309-12912 bp Neighborhood of RT #1 [9309, 12920] InsE PHA02517 RVT-GII RVT-GII GIIM PHA02517 COG3464 Feature: gene Location: 9309-9638 bp Feature: domain Description: InsE Location: 9315-9627 bp Feature: domain Description: InsE Location: 931 5-9627 bp Feature: gene Location: 9635-10171 bp Feature: domain Description: PHA02517 Location: 9701-10055 bp Feature: domain Description: PHA0251 7 Location: 9701 -1 0055 bp Feature: gene Location: 10711-11433 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10984-11371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0984-1 1 371 bp Feature: gene Location: 11411-12202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11555-11684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 555-1 1 684 bp Feature: domain Description: GIIM Note: maturase Location: 11756-11984 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 756-1 1 984 bp Feature: gene Location: 12282-12596 bp Feature: domain Description: PHA02517 Location: 12288-12525 bp Feature: domain Description: PHA0251 7 Location: 1 2288-1 2525 bp Feature: gene Location: 12654-12920 bp Feature: domain Description: COG3464 Location: 12669-12912 bp Feature: domain Description: COG3464 Location: 1 2669-1 291 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3464 (Transposase )

Seq: JACIHD010000032.1 Bradyrhizobium sp. ERR14 Ga0394405_32, whole genome shotgun sequence (61311 bp)
Overview 1 RT 1: 55880-59177 bp Neighborhood of RT #1 [55880, 59177] SRAP RVT-UG12 Feature: gene Location: 55880-56776 bp Feature: gene Location: 56865-57083 bp Feature: domain Description: SRAP Location: 56943-57039 bp Feature: domain Description: SRAP Location: 56943-57039 bp Feature: gene Location: 57090-58442 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 57219-57678 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 572 19-57678 bp Feature: gene Location: 58835-58966 bp Feature: gene Location: 59034-59177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRAP (pfam02586), RVT-UG12