myRT

myRT report for GCA_014198295.1_ASM1419829v1

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Seq: JACIHF010000027.1 Bradyrhizobium sp. CIR18 Ga0394410_27, whole genome shotgun sequence (44486 bp)
Overview 1 RT 1: 26630-33623 bp Neighborhood of RT #1 [26630, 33685] AAA_25 DUF4263 RVT-Retrons Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 26630-27985 bp Feature: domain Description: AAA_25 Location: 26744-27374 bp Feature: domain Description: AAA_25 Location: 26744-27374 bp Feature: gene Location: 28538-29746 bp Feature: domain Description: DUF4263 Location: 29153-29681 bp Feature: domain Description: DUF4263 Location: 291 53-29681 bp Feature: gene Location: 29967-31700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30102-30723 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 301 02-30723 bp Feature: gene Location: 32108-32302 bp Feature: gene Location: 32420-33685 bp Feature: domain Description: Arm-DNA-bind_3 Location: 32435-32705 bp Feature: domain Description: Arm-DNA-bind_3 Location: 32435-32705 bp Feature: domain Description: INT_P4_C Location: 33104-33623 bp Feature: domain Description: INT_P4_C Location: 331 04-33623 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), DUF4263 (pfam14082), RVT-Retrons, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)

Seq: JACIHF010000030.1 Bradyrhizobium sp. CIR18 Ga0394410_30, whole genome shotgun sequence (38451 bp)
Overview 1 RT 1: 25755-30992 bp Neighborhood of RT #1 [25755, 31030] COG3547 RVT-GII RVT-GII GIIM RVT-GII COG3436 COG3547 Feature: gene Location: 25755-26060 bp Feature: gene Location: 26167-27075 bp Feature: domain Description: COG3547 Location: 26452-26995 bp Feature: domain Description: COG3547 Location: 2 6452 -2 6995 bp Feature: gene Location: 27430-28176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27586-28057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7586-2 8057 bp Feature: gene Location: 28182-28385 bp Feature: gene Location: 28683-29834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28800-29382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8800-2 9382 bp Feature: domain Description: GIIM Note: maturase Location: 29577-29742 bp Feature: domain Description: GIIM Note: maturase Location: 2 9577-2 9742 bp Feature: gene Location: 29883-30158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29913-30084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9913-30084 bp Feature: gene Location: 30169-30663 bp Feature: domain Description: COG3436 Location: 30178-30613 bp Feature: domain Description: COG3436 Location: 30178-30613 bp Feature: gene Location: 30803-31030 bp Feature: domain Description: COG3547 Location: 30809-30992 bp Feature: domain Description: COG3547 Location: 30809-30992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), COG3436 (Transposase )