myRT

myRT report for GCA_014198365.1_ASM1419836v1

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Seq: JACIHI010000024.1 Rhizobium esperanzae strain SEMIA 414 Ga0394298_24, whole genome shotgun sequence (108631 bp)
Overview 1 RT 1: 72813-77288 bp Neighborhood of RT #1 [72813, 77288] DUF1837 RVT-Retrons Feature: gene Location: 72813-73139 bp Feature: gene Location: 73144-73968 bp Feature: domain Description: DUF1837 Location: 73387-73759 bp Feature: domain Description: DUF1 837 Location: 73387-73759 bp Feature: gene Location: 74031-75257 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74313-74976 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7431 3-74976 bp Feature: gene Location: 75440-76675 bp Feature: gene Location: 76689-77288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), RVT-Retrons

Seq: JACIHI010000044.1 Rhizobium esperanzae strain SEMIA 414 Ga0394298_44, whole genome shotgun sequence (5414 bp)
Overview 1 RT 1: 446-2968 bp Neighborhood of RT #1 [446, 3036] Ser_Recombinase RVT-GII DDE_3 RolB_RolC Feature: gene Location: 446-853 bp Feature: domain Description: Ser_Recombinase Location: 497-779 bp Feature: domain Description: Ser_Recombinase Location: 497-779 bp Feature: gene Location: 843-1046 bp Feature: gene Location: 1120-1974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264-1579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 64-1579 bp Feature: gene Location: 2232-2453 bp Feature: domain Description: DDE_3 Location: 2244-2361 bp Feature: domain Description: DDE_3 Location: 2 2 44-2 361 bp Feature: gene Location: 2776-3036 bp Feature: domain Description: RolB_RolC Location: 2782-2968 bp Feature: domain Description: RolB_RolC Location: 2 782 -2 968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_3 (pfam13358), RolB_RolC (pfam02027), Ser_Recombinase (cl02788)