myRT

myRT report for GCA_014200235.1_ASM1420023v1

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Seq: JACHBI010000007.1 Rhizobium paranaense strain SEMIA 4064 Ga0394383_07, whole genome shotgun sequence (360810 bp)
Overview 1 RT 1: 352114-358963 bp Neighborhood of RT #1 [352114, 358963] ManB INT_C_like_1 RVT-UG2 Feature: gene Location: 352114-353544 bp Feature: domain Description: ManB Location: 352129-353509 bp Feature: domain Description: ManB Location: 3521 29-353509 bp Feature: gene Location: 353810-355417 bp Feature: domain Description: INT_C_like_1 Location: 354803-355340 bp Feature: domain Description: INT_C_like_1 Location: 354803-355340 bp Feature: gene Location: 355543-356835 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 355573-356488 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 355573-356488 bp Feature: gene Location: 357095-357250 bp Feature: gene Location: 357785-358963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ManB (COG1109), INT_C_like_1 (cd01184), RVT-UG2

Seq: JACHBI010000011.1 Rhizobium paranaense strain SEMIA 4064 Ga0394383_11, whole genome shotgun sequence (219892 bp)
Overview 1 RT 1: 28634-31761 bp 2 RT 2: 176794-180792 bp Neighborhood of RT #1 [28634, 31761] COG5489 RVT_N RVT-GII GIIM Neighborhood of RT #2 [176794, 180899] RVT-GII GIIM DDE_Tnp_1 DDE_Tnp_1_6 Feature: gene Location: 28634-29110 bp Feature: gene Location: 29251-29559 bp Feature: domain Description: COG5489 Location: 29254-29557 bp Feature: domain Description: COG5489 Location: 2 92 54-2 9557 bp Feature: gene Location: 29845-31365 bp Feature: domain Description: RVT_N Location: 29896-30124 bp Feature: domain Description: RVT_N Location: 2 9896-3012 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30184-30823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30184-3082 3 bp Feature: domain Description: GIIM Note: maturase Location: 30880-31108 bp Feature: domain Description: GIIM Note: maturase Location: 30880-31108 bp Feature: gene Location: 31449-31595 bp Feature: gene Location: 31621-31761 bp Feature: gene Location: 176794-177792 bp Feature: gene Location: 177975-178604 bp Feature: gene Location: 178639-179961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 178927-179584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17892 7-179584 bp Feature: domain Description: GIIM Note: maturase Location: 179653-179866 bp Feature: domain Description: GIIM Note: maturase Location: 179653-179866 bp Feature: gene Location: 179980-180495 bp Feature: domain Description: DDE_Tnp_1 Location: 180076-180454 bp Feature: domain Description: DDE_Tnp_1 Location: 180076-180454 bp Feature: gene Location: 180516-180899 bp Feature: domain Description: DDE_Tnp_1_6 Location: 180621-180792 bp Feature: domain Description: DDE_Tnp_1_6 Location: 18062 1-180792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5489 (Uncharacterized conserved protein, DUF736 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), DDE_Tnp_1_6 (pfam13751)

Seq: JACHBI010000046.1 Rhizobium paranaense strain SEMIA 4064 Ga0394383_46, whole genome shotgun sequence (1629 bp)
Overview 1 RT 1: 304-1473 bp Neighborhood of RT #1 [304, 1473] RVT-GII Feature: gene Location: 304-756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-63 7 bp Feature: gene Location: 899-1186 bp Feature: gene Location: 1207-1473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII