myRT

myRT report for GCA_014200675.1_ASM1420067v1

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Seq: JACHCI010000008.1 Janthinobacterium sp. S3T4 Ga0401195_08, whole genome shotgun sequence (217725 bp)
Overview 1 RT 1: 39355-45655 bp Neighborhood of RT #1 [39355, 45655] hypoth_ymh RVT-Retrons Trypsin_2 HTH_31 Feature: gene Location: 39355-40104 bp Feature: gene Location: 40315-41133 bp Feature: domain Description: hypoth_ymh Location: 40741-41113 bp Feature: domain Description: hypoth_ymh Location: 40741 -41 1 1 3 bp Feature: gene Location: 41494-43293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41656-42262 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41 656-42262 bp Feature: domain Description: Trypsin_2 Location: 42739-43198 bp Feature: domain Description: Trypsin_2 Location: 42739-431 98 bp Feature: gene Location: 44343-44738 bp Feature: domain Description: HTH_31 Location: 44361-44547 bp Feature: domain Description: HTH_31 Location: 44361 -44547 bp Feature: gene Location: 44924-45655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hypoth_ymh (TIGR02391), RVT-Retrons, Trypsin_2 (pfam13365), HTH_31 (pfam13560)

Seq: JACHCI010000011.1 Janthinobacterium sp. S3T4 Ga0401195_11, whole genome shotgun sequence (192885 bp)
Overview 1 RT 1: 191641-192730 bp Neighborhood of RT #1 [191641, 192882] RpmB rpmG RVT-GII GIIM Feature: gene Location: 191641-191841 bp Feature: domain Description: RpmB Location: 191644-191830 bp Feature: domain Description: RpmB Location: 191644-191830 bp Feature: gene Location: 191864-192031 bp Feature: domain Description: rpmG Location: 191867-192023 bp Feature: domain Description: rpmG Location: 191867-192 02 3 bp Feature: gene Location: 192208-192882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192211-192463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192 2 11-192 463 bp Feature: domain Description: GIIM Note: maturase Location: 192520-192730 bp Feature: domain Description: GIIM Note: maturase Location: 192 52 0-192 730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RpmB (COG0227), rpmG (PRK00595), RVT-GII, GIIM (pfam08388)