myRT

myRT report for GCA_014201195.1_ASM1420119v1

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Seq: JACHDS010000001.1 Nocardiopsis mwathae strain DSM 46659 Ga0415213_01, whole genome shotgun sequence (5904107 bp)
Overview 1 RT 1: 3398874-3403100 bp 2 RT 2: 4896615-4901296 bp Neighborhood of RT #1 [3398874, 3403100] PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [4896615, 4901340] PHA02517 RVT-GII rve PHA02517 Feature: gene Location: 3398874-3399854 bp Feature: gene Location: 3399827-3400072 bp Feature: domain Description: PHA02517 Location: 3399830-3399998 bp Feature: domain Description: PHA0251 7 Location: 3399830-3399998 bp Feature: gene Location: 3400661-3402052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3400922-3401609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3400922-3401 609 bp Feature: domain Description: GIIM Note: maturase Location: 3401684-3401879 bp Feature: domain Description: GIIM Note: maturase Location: 3401 684-3401 879 bp Feature: gene Location: 3402404-3402682 bp Feature: domain Description: PHA02517 Location: 3402503-3402638 bp Feature: domain Description: PHA0251 7 Location: 3402503-3402638 bp Feature: gene Location: 3402876-3403100 bp Feature: gene Location: 4896615-4897484 bp Feature: domain Description: PHA02517 Location: 4896675-4897458 bp Feature: domain Description: PHA0251 7 Location: 4896675-4897458 bp Feature: gene Location: 4898287-4898526 bp Feature: gene Location: 4898736-4900202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4898916-4899711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489891 6-489971 1 bp Feature: gene Location: 4900737-4901090 bp Feature: domain Description: rve Location: 4900758-4901010 bp Feature: domain Description: rve Location: 4900758-4901 01 0 bp Feature: gene Location: 4901122-4901340 bp Feature: domain Description: PHA02517 Location: 4901128-4901296 bp Feature: domain Description: PHA0251 7 Location: 4901 1 28-4901 296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), rve (pfam00665)