myRT

myRT report for GCA_014201785.1_ASM1420178v1

Download annotations/find similar RTs

Seq: JACHFI010000001.1 Chryseobacterium koreense strain DSM 25209 Ga0415363_01, whole genome shotgun sequence (469526 bp)
Overview 1 RT 1: 66700-71890 bp Neighborhood of RT #1 [66700, 72351] Bac_Flav_CT_G RVT-GII group_II_RT_mat HNHc Bac_Flav_CT_G DUF4141 Feature: gene Location: 66700-68790 bp Feature: domain Description: Bac_Flav_CT_G Location: 66703-68779 bp Feature: domain Description: Bac_Flav_CT_G Location: 66703-68779 bp Feature: gene Location: 68821-68955 bp Feature: gene Location: 69335-71146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69599-70421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69599-70421 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 70631-70751 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 70631 -70751 bp Feature: domain Description: HNHc Note: nucleases Location: 70964-71120 bp Feature: domain Description: HNHc Note: nucleases Location: 70964-71 1 20 bp Feature: gene Location: 71242-71691 bp Feature: domain Description: Bac_Flav_CT_G Location: 71254-71668 bp Feature: domain Description: Bac_Flav_CT_G Location: 71 254-71 668 bp Feature: gene Location: 71719-72351 bp Feature: domain Description: DUF4141 Location: 71734-71890 bp Feature: domain Description: DUF41 41 Location: 71 734-71 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_G (TIGR03783), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), DUF4141 (pfam13605)

Seq: JACHFI010000002.1 Chryseobacterium koreense strain DSM 25209 Ga0415363_02, whole genome shotgun sequence (316431 bp)
Overview 1 RT 1: 302037-306566 bp Neighborhood of RT #1 [302037, 306637] RVT-UG2 HsdM RMtype1_S_TRD-CR_like Feature: gene Location: 302037-302174 bp Feature: gene Location: 302568-302714 bp Feature: gene Location: 302741-304264 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 302972-303890 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 302 972 -303890 bp Feature: gene Location: 304315-304548 bp Feature: gene Location: 304637-306637 bp Feature: domain Description: HsdM Location: 304661-306050 bp Feature: domain Description: HsdM Location: 304661-306050 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 306152-306566 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 306152 -306566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, HsdM (COG0286), RMtype1_S_TRD-CR_like (cl38903)

Seq: JACHFI010000032.1 Chryseobacterium koreense strain DSM 25209 Ga0415363_32, whole genome shotgun sequence (3612 bp)
Overview 1 RT 1: 32-2582 bp Neighborhood of RT #1 [32, 2582] RVT-DGRs Feature: gene Location: 32-247 bp Feature: gene Location: 249-479 bp Feature: gene Location: 532-1530 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 778-1369 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 778-13 69 bp Feature: gene Location: 1712-2101 bp Feature: gene Location: 2115-2582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs