myRT

myRT report for GCA_014203835.1_ASM1420383v1

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Seq: JACHJW010000001.1 Micromonospora polyrhachis strain DSM 45886 Ga0436963_01, whole genome shotgun sequence (7152484 bp)
Overview 1 RT 1: 1886361-1894775 bp 2 RT 2: 3250590-3257038 bp 3 RT 3: 3534321-3539131 bp 4 RT 4: 4487263-4492846 bp Neighborhood of RT #1 [1886361, 1894786] WHTH_GntR DDE_Tnp_1_4 RVT-GII GIIM Tetrahydromethanopterin_reductase Hemerythrin DUF3103 Neighborhood of RT #2 [3250590, 3257088] DDE_Tnp_1_4 RVT-GII GIIM NfeD Neighborhood of RT #3 [3534321, 3539145] YcjU RVT-GII GIIM DDE_Tnp_1_4 Neighborhood of RT #4 [4487263, 4493112] RVT-UG22 DUF2637 Replic_Relax Feature: gene Location: 1886361-1886579 bp Feature: domain Description: WHTH_GntR Location: 1886376-1886568 bp Feature: domain Description: WHTH_GntR Location: 1 886376-1 886568 bp Feature: gene Location: 1886982-1888379 bp Feature: domain Description: DDE_Tnp_1_4 Location: 1886997-1888365 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 1 886997-1 888365 bp Feature: gene Location: 1888653-1890029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1888968-1889598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 888968-1 889598 bp Feature: domain Description: GIIM Note: maturase Location: 1889685-1889895 bp Feature: domain Description: GIIM Note: maturase Location: 1 889685-1 889895 bp Feature: gene Location: 1891807-1893408 bp Feature: domain Description: Tetrahydromethanopterin_reductase Location: 1891837-1892716 bp Feature: domain Description: Tetrahydromethanopterin_reductase Location: 1 891 837-1 89271 6 bp Feature: domain Description: Hemerythrin Location: 1892953-1893379 bp Feature: domain Description: Hemerythrin Location: 1 892953-1 893379 bp Feature: gene Location: 1893617-1894786 bp Feature: domain Description: DUF3103 Location: 1893881-1894775 bp Feature: domain Description: DUF31 03 Location: 1 893881 -1 894775 bp Feature: gene Location: 3250590-3250850 bp Feature: gene Location: 3251976-3253376 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3251991-3253362 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3251 991 -3253362 bp Feature: gene Location: 3253678-3255069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254008-3254638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3254008-3254638 bp Feature: domain Description: GIIM Note: maturase Location: 3254725-3254935 bp Feature: domain Description: GIIM Note: maturase Location: 3254725-3254935 bp Feature: gene Location: 3255724-3256482 bp Feature: gene Location: 3256564-3257088 bp Feature: domain Description: NfeD Location: 3256801-3257038 bp Feature: domain Description: NfeD Location: 3256801 -3257038 bp Feature: gene Location: 3534321-3534968 bp Feature: gene Location: 3535156-3535509 bp Feature: domain Description: YcjU Location: 3535168-3535483 bp Feature: domain Description: YcjU Location: 35351 68-3535483 bp Feature: gene Location: 3536069-3537445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3536384-3537014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3536384-353701 4 bp Feature: domain Description: GIIM Note: maturase Location: 3537101-3537311 bp Feature: domain Description: GIIM Note: maturase Location: 35371 01 -353731 1 bp Feature: gene Location: 3537745-3539145 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3537760-3539131 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3537760-35391 31 bp Feature: gene Location: 4487263-4487610 bp Feature: gene Location: 4487737-4488216 bp Feature: gene Location: 4488387-4489946 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 4488657-4489245 bp Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 4488657-4489245 bp Feature: gene Location: 4491012-4491728 bp Feature: domain Description: DUF2637 Location: 4491018-4491339 bp Feature: domain Description: DUF2637 Location: 4491 01 8-4491 339 bp Feature: gene Location: 4492165-4493112 bp Feature: domain Description: Replic_Relax Location: 4492243-4492846 bp Feature: domain Description: Replic_Relax Location: 4492243-4492846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WHTH_GntR (cd07377), DDE_Tnp_1_4 (pfam13701), RVT-GII, GIIM (pfam08388), Tetrahydromethanopterin_reductase (cd01097), Hemerythrin (TIGR00058), DUF3103 (pfam11301), NfeD (pfam01957), YcjU (COG0637), RVT-UG22
DUF2637 (pfam10935), Replic_Relax (pfam13814)