myRT

myRT report for GCA_014207255.1_ASM1420725v1

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Seq: JACHCZ010000003.1 Pseudomonas sp. JAI120 Ga0401626_03, whole genome shotgun sequence (770932 bp)
Overview 1 RT 1: 30713-37603 bp Neighborhood of RT #1 [30713, 37653] RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 30713-30871 bp Feature: gene Location: 31222-31386 bp Feature: gene Location: 31711-33420 bp Feature: RT Description: RVT_N Location: 31768-32011 bp Feature: RT Description: RVT_N Location: 31 768-3201 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32056-32692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32056-32692 bp Feature: domain Description: GIIM Note: maturase Location: 32743-32977 bp Feature: domain Description: GIIM Note: maturase Location: 32743-32977 bp Feature: domain Description: HNH Note: nucleases Location: 33229-33367 bp Feature: domain Description: HNH Note: nucleases Location: 33229-33367 bp Feature: gene Location: 33564-36338 bp Feature: domain Description: LptD Location: 33825-36321 bp Feature: domain Description: LptD Location: 33825-36321 bp Feature: gene Location: 36313-37653 bp Feature: domain Description: PRK10770 Location: 36397-37603 bp Feature: domain Description: PRK1 0770 Location: 36397-37603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: JACHCZ010000006.1 Pseudomonas sp. JAI120 Ga0401626_06, whole genome shotgun sequence (352964 bp)
Overview 1 RT 1: 118104-122326 bp Neighborhood of RT #1 [118104, 122326] MFS_YcxA_like HTH_ARSR RVT-GII RVT-GII Feature: gene Location: 118104-119369 bp Feature: domain Description: MFS_YcxA_like Location: 118149-119313 bp Feature: domain Description: MFS_YcxA_like Location: 118149-119313 bp Feature: gene Location: 119425-120120 bp Feature: domain Description: HTH_ARSR Location: 119470-119689 bp Feature: domain Description: HTH_ARSR Location: 119470-119689 bp Feature: gene Location: 120277-121071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120961-121069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 0961-12 1069 bp Feature: gene Location: 121125-121502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121149-121497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 1149-12 1497 bp Feature: gene Location: 121610-121762 bp Feature: gene Location: 122009-122326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_YcxA_like (cd17355), HTH_ARSR (smart00418), RVT-GII