myRT

myRT report for GCA_014207275.1_ASM1420727v1

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Seq: JACHCT010000003.1 Pseudomonas sp. SJZ073 Ga0401610_03, whole genome shotgun sequence (770989 bp)
Overview 1 RT 1: 30713-37603 bp Neighborhood of RT #1 [30713, 37653] RVT_N RVT-GII GIIM HNH LptD PRK10770 Feature: gene Location: 30713-30871 bp Feature: gene Location: 31222-31386 bp Feature: gene Location: 31711-33420 bp Feature: RT Description: RVT_N Location: 31768-32011 bp Feature: RT Description: RVT_N Location: 31 768-3201 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32056-32692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32056-32692 bp Feature: domain Description: GIIM Note: maturase Location: 32743-32977 bp Feature: domain Description: GIIM Note: maturase Location: 32743-32977 bp Feature: domain Description: HNH Note: nucleases Location: 33229-33367 bp Feature: domain Description: HNH Note: nucleases Location: 33229-33367 bp Feature: gene Location: 33564-36338 bp Feature: domain Description: LptD Location: 33825-36321 bp Feature: domain Description: LptD Location: 33825-36321 bp Feature: gene Location: 36313-37653 bp Feature: domain Description: PRK10770 Location: 36397-37603 bp Feature: domain Description: PRK1 0770 Location: 36397-37603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: JACHCT010000006.1 Pseudomonas sp. SJZ073 Ga0401610_06, whole genome shotgun sequence (352964 bp)
Overview 1 RT 1: 230639-234805 bp Neighborhood of RT #1 [230639, 234861] RVT-GII RVT-GII HTH_ARSR MFS_YcxA_like Feature: gene Location: 230639-230956 bp Feature: gene Location: 231203-231355 bp Feature: gene Location: 231463-231840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231487-231835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 31487-2 31835 bp Feature: gene Location: 231894-232718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232608-232716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 32 608-2 32 716 bp Feature: gene Location: 232845-233540 bp Feature: domain Description: HTH_ARSR Location: 232890-233109 bp Feature: domain Description: HTH_ARSR Location: 2 32 890-2 33109 bp Feature: gene Location: 233596-234861 bp Feature: domain Description: MFS_YcxA_like Location: 233641-234805 bp Feature: domain Description: MFS_YcxA_like Location: 2 33641-2 34805 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HTH_ARSR (smart00418), MFS_YcxA_like (cd17355)