myRT

myRT report for GCA_014207355.1_ASM1420735v1

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Seq: JACHEF010000020.1 Mesorhizobium sangaii strain DSM 100039 Ga0415300_20, whole genome shotgun sequence (20836 bp)
Overview 1 RT 1: 17421-20512 bp Neighborhood of RT #1 [17421, 20592] PRK07658 QOR1 RVT-GII DDE_3 Feature: gene Location: 17421-18209 bp Feature: domain Description: PRK07658 Location: 17436-18207 bp Feature: domain Description: PRK07658 Location: 1 7436-1 8207 bp Feature: gene Location: 18357-19343 bp Feature: domain Description: QOR1 Location: 18360-19335 bp Feature: domain Description: QOR1 Location: 1 8360-1 9335 bp Feature: gene Location: 19877-20080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19886-20024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9886-20024 bp Feature: gene Location: 20101-20592 bp Feature: domain Description: DDE_3 Location: 20353-20512 bp Feature: domain Description: DDE_3 Location: 20353-2051 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07658 (enoyl-CoA hydratase; Provisional), QOR1 (cd08241), RVT-GII, DDE_3 (pfam13358)

Seq: JACHEF010000022.1 Mesorhizobium sangaii strain DSM 100039 Ga0415300_22, whole genome shotgun sequence (14941 bp)
Overview 1 RT 1: 7591-11197 bp Neighborhood of RT #1 [7591, 11247] IS285 GIIM RVT-GII INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 7591-8112 bp Feature: domain Description: IS285 Location: 7675-8008 bp Feature: domain Description: IS2 85 Location: 7675-8008 bp Feature: gene Location: 8435-8626 bp Feature: domain Description: GIIM Note: maturase Location: 8441-8576 bp Feature: domain Description: GIIM Note: maturase Location: 8441-8576 bp Feature: gene Location: 8668-8949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8755-8860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8755-8860 bp Feature: gene Location: 9254-9883 bp Feature: domain Description: INT_RitA_C_like Location: 9329-9854 bp Feature: domain Description: INT_RitA_C_like Location: 932 9-9854 bp Feature: gene Location: 9880-11247 bp Feature: domain Description: INT_RitB_C_like Location: 10603-11197 bp Feature: domain Description: INT_RitB_C_like Location: 10603-11197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), GIIM (pfam08388), RVT-GII, INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: JACHEF010000027.1 Mesorhizobium sangaii strain DSM 100039 Ga0415300_27, whole genome shotgun sequence (3480 bp)
Overview 1 RT 1: 230-2453 bp Neighborhood of RT #1 [230, 2453] COG3415 RVT-GII RVT-GII Feature: gene Location: 230-712 bp Feature: domain Description: COG3415 Location: 305-641 bp Feature: domain Description: COG3 415 Location: 3 05-641 bp Feature: gene Location: 885-1283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972-1269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 972-1269 bp Feature: gene Location: 1186-1416 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306-1414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 06-1414 bp Feature: gene Location: 1812-2078 bp Feature: gene Location: 2244-2453 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), RVT-GII