myRT

myRT report for GCA_014212055.1_ASM1421205v1

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Seq: JACJVO010000021.1 Cohnella sp. CBP 2801 contig_21, whole genome shotgun sequence (329599 bp)
Overview 1 RT 1: 150168-154081 bp 2 RT 2: 175478-179610 bp Neighborhood of RT #1 [150168, 154086] RVT-GII GIIM MhpC Neighborhood of RT #2 [175478, 179639] Peptidase_G1 RVT-GII GIIM DDE_3 HTH_32 HTH_32 Feature: gene Location: 150168-150662 bp Feature: gene Location: 150871-151110 bp Feature: gene Location: 151278-152669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151620-152238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 620-1 52238 bp Feature: domain Description: GIIM Note: maturase Location: 152289-152499 bp Feature: domain Description: GIIM Note: maturase Location: 1 52289-1 52499 bp Feature: gene Location: 152784-153209 bp Feature: gene Location: 153265-154086 bp Feature: domain Description: MhpC Location: 153307-154081 bp Feature: domain Description: MhpC Location: 1 53307-1 54081 bp Feature: gene Location: 175478-175606 bp Feature: gene Location: 176595-177494 bp Feature: domain Description: Peptidase_G1 Location: 176901-177486 bp Feature: domain Description: Peptidase_G1 Location: 1 76901 -1 77486 bp Feature: gene Location: 177737-178273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 177746-177842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 77746-1 77842 bp Feature: domain Description: GIIM Note: maturase Location: 177893-178103 bp Feature: domain Description: GIIM Note: maturase Location: 1 77893-1 781 03 bp Feature: gene Location: 178722-178979 bp Feature: domain Description: DDE_3 Location: 178785-178977 bp Feature: domain Description: DDE_3 Location: 1 78785-1 78977 bp Feature: gene Location: 179172-179639 bp Feature: domain Description: HTH_32 Location: 179187-179274 bp Feature: domain Description: HTH_32 Location: 1 791 87-1 79274 bp Feature: domain Description: HTH_32 Location: 179367-179610 bp Feature: domain Description: HTH_32 Location: 1 79367-1 7961 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), MhpC (COG0596), Peptidase_G1 (cd13426), DDE_3 (pfam13358), HTH_32 (pfam13565)

Seq: JACJVO010000067.1 Cohnella sp. CBP 2801 contig_67, whole genome shotgun sequence (1926 bp)
Overview 1 RT 1: 104-1340 bp Neighborhood of RT #1 [104, 1396] RVT-GII GIIM Feature: gene Location: 104-1396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 404-1037 bp Feature: domain Description: GIIM Note: maturase Location: 1124-1340 bp Feature: domain Description: GIIM Note: maturase Location: 112 4-1340 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACJVO010000070.1 Cohnella sp. CBP 2801 contig_70, whole genome shotgun sequence (1666 bp)
Overview 1 RT 1: 363-1596 bp Neighborhood of RT #1 [363, 1655] RVT-GII GIIM Feature: gene Location: 363-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663-1296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 663 -1296 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)